Pairwise Alignments

Query, 498 a.a., Na+/H+ antiporter subunit D from Vibrio cholerae E7946 ATCC 55056

Subject, 510 a.a., NADH:ubiquinone oxidoreductase subunit M from Pseudomonas simiae WCS417

 Score =  160 bits (404), Expect = 1e-43
 Identities = 120/425 (28%), Positives = 219/425 (51%), Gaps = 29/425 (6%)

Query: 65  WPAPFGI-VFVA-DLLSVGMVMVTAIIGLVSVIYAIADLSAKPSYARYHALLHVLLAGVY 122
           W   FGI V +A D LS+ M+++T ++G++SV+ +  ++     +  +H  L  +L GV 
Sbjct: 72  WIQRFGINVHLALDGLSLLMILLTGLLGILSVLCSWKEIQRHVGF--FHLNLMWILGGVV 129

Query: 123 GAFLTGDIFNLYVWFEVMLIASFGLMVL------DANQQQIDGAIKYVLLNLISTLVFLL 176
           G FL  D+F  + ++E+ML+  + L+ L      D  + +I  A K+ +    S L+ L+
Sbjct: 130 GVFLALDLFMFFFFWEMMLVPMYFLIALWGHSSSDGKKTRIYAATKFFIFTQASGLIMLV 189

Query: 177 SI-GLL---YGATG--TLNLADLHDKAQSLAPEMKTMLAGLLLFAFSIKAALFPLFAWLP 230
           +I GL+   +  TG  T N ADL     SL  E   ML      AF++K  + P  +WLP
Sbjct: 190 AILGLVLVNFNNTGVITFNYADLLKTKMSLTTEYILMLG--FFIAFAVKLPVVPFHSWLP 247

Query: 231 ASYHTLPSAIVALFAALLTKVGVYALLRVFTLVFPLDGSGWQPVLLGIAALTMLTGVLGA 290
            ++   P+A     A +L K   Y LLR    +FP   + + P+ + +  + +  G   A
Sbjct: 248 DAHAQAPTAGSVDLAGILLKTAAYGLLRFALPLFPNASAEFAPIAMTLGLIGIFYGAFLA 307

Query: 291 ASQYDIKKILSFHIISQIGYMIMGLAIYTPLAITGAIFYVIHHILVKGNLFLIGGLIGRK 350
            +Q DIK++++F  +S +G++++G+   + LA+ GA+  ++ H +    LF++ G +  +
Sbjct: 308 FAQTDIKRLIAFSSVSHMGFVLIGIYSGSQLALQGAVIQMLAHGVSAAALFILSGQLYER 367

Query: 351 YGTTQLTQLGGVYRAMPWLTFGFLLAAFSLAGFPPLSGFWGKFLVIKASLAAELYWLAAI 410
             T  + ++GGV+  + +L    L  A +  G P    F G+FL++  +   +  W++AI
Sbjct: 368 LHTRDMREMGGVWSRIAYLPAISLFFAAASLGLPGTGNFIGEFLILMGAF-VQTPWISAI 426

Query: 411 A---LLVGLLTIFSMTKIWNEVFWKDAPAALQQETLARSTLGLYALPILVLTLFSLVIGL 467
           A   L+ G  +++S+  I    F    PA  + +T+ +       + +L L +  + IG+
Sbjct: 427 ATSGLVFG--SVYSLIMIHRAYF---GPA--KSDTVLQGMDARELIMVLGLAVLLIYIGV 479

Query: 468 AAQPF 472
             QPF
Sbjct: 480 YPQPF 484