Pairwise Alignments

Query, 498 a.a., Na+/H+ antiporter subunit D from Vibrio cholerae E7946 ATCC 55056

Subject, 572 a.a., Na(+) H(+) antiporter subunit D from Variovorax sp. SCN45

 Score =  243 bits (621), Expect = 1e-68
 Identities = 170/541 (31%), Positives = 265/541 (48%), Gaps = 61/541 (11%)

Query: 6   LTLPVVISLLTAVAIFLAGRNRWLTNG-LSVICSVINLFTGALLTITIYTH----GPASI 60
           + +P+++ +LTA  + L G NR  T   LSV+  ++ L     L   +       GP SI
Sbjct: 20  VAVPILVPMLTAALMLLLGENRRRTKSFLSVVSGLVGLLAALALLRWVNAPETGGGPGSI 79

Query: 61  AF---GQWPAPFGIVFVADLLSVGMVMVTAIIGLVSVIYAIADLSAKPSYARYHALLHVL 117
                G W APFGIV VAD LS  MV +T ++   + IY+ +      +   +H LL + 
Sbjct: 80  GVYLPGNWRAPFGIVLVADRLSTMMVALTGVVAFAASIYSTSRWDR--AGVHFHPLLQLQ 137

Query: 118 LAGVYGAFLTGDIFNLYVWFEVMLIASFGLMVLDANQQQIDGAIKYVLLNLISTLVFLLS 177
           L G+ GAFLTGD+FNL+V+FEVML AS+GL++  + + ++   + Y+ +NL ++ +FL+ 
Sbjct: 138 LMGLNGAFLTGDLFNLFVFFEVMLAASYGLLLHGSGRLRVQAGLHYIAINLAASSLFLIG 197

Query: 178 IGLLYGATGTLNLADLHDKAQSLAPEMKTML---AGLLLFAFSIKAALFPLFAWLPASYH 234
             +LYG TGTLN+ADL  +   LAP  + ++     +L  AF  KA  +PL  WL  +Y 
Sbjct: 198 AAILYGVTGTLNMADLGMRIAELAPGDRGLVHAATAILFTAFFAKAGAWPLNFWLVPAYS 257

Query: 235 TLPSAIVALFAALLTKVGVYALLRVFTLVFPLD----GSGWQPVLLGIAALTMLTGVLGA 290
           +  S + A+F ALLTK+GVY +LR++T++F  D     +  QPVL+G    T+     G 
Sbjct: 258 SAVSPVGAVF-ALLTKLGVYTVLRLWTVLFAPDTGASAAFGQPVLVGAGIATLFVAAFGI 316

Query: 291 ASQYDIKKILSFHIISQIGYMIMGLAIYTPLAITGAIFYVIHHILVKGNLFLIGGLIGR- 349
                +  +  F ++   G ++  + +  P    GA+FY++   L     FL+  +I R 
Sbjct: 317 VGTQRLSNLAGFSVLISAGTLLAAVGLGQPAVWAGALFYMLSSTLAVSAFFLLIDMIERW 376

Query: 350 ----------------KYGTTQLTQLGGVY----------RAMP----WLTFGFLLAAFS 379
                            +    L+ L  V           RA+P    +L   FL+    
Sbjct: 377 RNAGMSVAPHEAAGTAPFLAEDLSALSDVNLDDDAQALYGRAIPAGVAFLGLSFLICTLL 436

Query: 380 LAGFPPLSGFWGKFLV------IKASLAAELYWLAAIALLVGLLTIFSMTKIWNEVFWKD 433
           L G PPLSGF GKF +      +  ++ A  +    + +  G L + ++T+     FW  
Sbjct: 437 LTGLPPLSGFVGKFAMLTGLMGVNGAIGAAGWTFLVLLIASGFLALIALTRTGIRHFWTQ 496

Query: 434 APAALQQETLARSTLGLYALPILVLTLFSLVIGLAAQPFYQFATLAAEQLLTPTAYIHAV 493
               L       S   L  LP+  L    + + + A+P  + A   AE L TPTAY  AV
Sbjct: 497 PHGNLP------SLPALEVLPVAGLIATCIALTVWAEPVLRHAMATAEGLRTPTAYRAAV 550

Query: 494 L 494
           +
Sbjct: 551 M 551