Pairwise Alignments

Query, 498 a.a., Na+/H+ antiporter subunit D from Vibrio cholerae E7946 ATCC 55056

Subject, 510 a.a., NADH dehydrogenase subunit M from Pseudomonas syringae pv. syringae B728a ΔmexB

 Score =  166 bits (421), Expect = 1e-45
 Identities = 137/502 (27%), Positives = 243/502 (48%), Gaps = 39/502 (7%)

Query: 5   GLTLPVVISLLTAVAIFLAGRNRWLTNGLSVICSVINLFTGALLTITIYTHGPASIAFGQ 64
           G TLP  I+LLT     + G   W T              GA  T T+  H P       
Sbjct: 24  GSTLPRWIALLTMTLELVLGLWLWATGNFGYAP-----VPGADPTWTLEFHHP------- 71

Query: 65  WPAPFGI-VFVA-DLLSVGMVMVTAIIGLVSVIYAIADLSAKPSYARYHALLHVLLAGVY 122
           W   FGI V +A D LS+ M+++T ++G++SV+ +  ++  K  +  +H  L  +L GV 
Sbjct: 72  WITRFGIDVHLALDGLSLLMILLTGLLGVLSVLCSWKEIQRKVGF--FHLNLMWILGGVV 129

Query: 123 GAFLTGDIFNLYVWFEVMLIASFGLMVL------DANQQQIDGAIKYVLLNLISTLVFLL 176
           G FL  D+F  + ++E+ML+  + L+ L      D  + +I  A K+ +    S L+ L+
Sbjct: 130 GVFLAIDLFMFFFFWEMMLVPMYFLIALWGHSSSDGKKTRIYAATKFFIFTQASGLIMLV 189

Query: 177 SI-GLL---YGATGTLNLADLHDKAQSLAPEMKTMLAGLLLFAFSIKAALFPLFAWLPAS 232
           +I GL+   +  TG +  A        LAP  + +L      AF++K  + PL +WLP +
Sbjct: 190 AILGLVLVHFNQTGVITFAYADLLKTKLAPGTEYILMLGFFIAFAVKLPVVPLHSWLPDA 249

Query: 233 YHTLPSAIVALFAALLTKVGVYALLRVFTLVFPLDGSGWQPVLLGIAALTMLTGVLGAAS 292
           +   P+A     A +L K   Y LLR    +FP   + + P+ + +  + +  G   A +
Sbjct: 250 HAQAPTAGSVDLAGILLKTAAYGLLRFALPLFPNASAEFAPIAMTLGLVGIFYGAFLAFA 309

Query: 293 QYDIKKILSFHIISQIGYMIMGLAIYTPLAITGAIFYVIHHILVKGNLFLIGGLIGRKYG 352
           Q DIK++++F  +S +G++++G+   +  A+ G +  +I H L    LF++ G +  +  
Sbjct: 310 QTDIKRLIAFSSVSHMGFVLIGIYSGSQQALQGVLIQMIAHGLSAAALFILSGQLYERLH 369

Query: 353 TTQLTQLGGVYRAMPWLTFGFLLAAFSLAGFPPLSGFWGKFLVIKASLAAELYWLAAIA- 411
           T  + ++GG++  + ++    L  A +  G P    F G+FL++  S A+   W+ AIA 
Sbjct: 370 TRDMREMGGLWSRIAYIPAISLFFAAASLGLPGTGNFVGEFLILLGSFASS-PWITAIAT 428

Query: 412 --LLVGLLTIFSMTKIWNEVFWKDAPAALQQETLARSTLGLYALPILVLTLFSLVIGLAA 469
             L+ G  +++S+  I    F        + + + +   G   + +L L +  +V+G+  
Sbjct: 429 SGLVFG--SVYSLIMIHRAYF-----GPSKSDEVLKGMDGREMIMVLGLAVLLVVLGVFP 481

Query: 470 QPFY--QFATLAAEQLLTPTAY 489
           QPF     AT+   Q    TA+
Sbjct: 482 QPFLDTSAATMHGVQQWLGTAF 503