Pairwise Alignments

Query, 498 a.a., Na+/H+ antiporter subunit D from Vibrio cholerae E7946 ATCC 55056

Subject, 491 a.a., NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  151 bits (381), Expect = 6e-41
 Identities = 127/502 (25%), Positives = 243/502 (48%), Gaps = 38/502 (7%)

Query: 6   LTLPVVISLLTAVAIFLAGRN------RWLTNGLSVICSVINLFTGALLTITIYTH---G 56
           L+L +   +   V +   GR+      RW+        +++    G  +T+ +YT    G
Sbjct: 4   LSLAIWTPIFFGVVLLALGRDDQAHAVRWI--------ALVGAIAGLAVTVPLYTGFELG 55

Query: 57  PASIAFGQ---WPAPFGIVFV--ADLLSVGMVMVTAIIGLVSVIYAIADLSAKPSYARYH 111
            A++ F +   W   F + +    D +S+ +V++TA I +V V+ +   ++++ +  +Y 
Sbjct: 56  TAAMQFVEKRVWIENFNVNYHLGVDGISLWLVLLTAFINVVVVVASWESITSRVN--QYM 113

Query: 112 ALLHVLLAGVYGAFLTGDIFNLYVWFEVMLIASFGLMVLDANQQQIDGAIKYVLLNLIST 171
               +L   + G F   D    YV+FE  LI  + ++ +     +I  A K+ L  L+ +
Sbjct: 114 GAFLILSGLMIGVFSAQDAMLFYVFFEATLIPMYLIIGIWGGPNKIYAAFKFFLYTLLGS 173

Query: 172 LVFLLSIGLLYGATG-TLNLADLHDKAQSLAPEMKTMLAGLLLFAFSIKAALFPLFAWLP 230
           L+ L+++  LY  +G +  LAD +     L    +T+L      AF++K  ++P+  WLP
Sbjct: 174 LLMLVALIYLYTQSGGSFALADWYKLP--LGGTAQTLLFFAFFAAFAVKVPMWPVHTWLP 231

Query: 231 ASYHTLPSAIVALFAALLTKVGVYALLRVFTLVFPLDGSGWQPVLLGIAALTMLTGVLGA 290
             +   P+   A+ AA++ K+G Y  LR    + P     W  +++ ++ + ++   L A
Sbjct: 232 DVHVEAPTGGSAVLAAIMLKLGAYGFLRFSLPILPDAAHEWAWLMIALSLVAVIYVGLVA 291

Query: 291 ASQYDIKKILSFHIISQIGYMIMGLAIYTPLAITGAIFYVIHHILVKGNLFLIGGLIGRK 350
             Q D+KK++++  ++ +G++ +G  +++ L ++GAI  +I H  V   +FL  G++  +
Sbjct: 292 MVQQDMKKLVAYSSVAHMGFVTLGFFVFSDLGVSGAIVQMIAHGFVSAAMFLGIGVLYDR 351

Query: 351 YGTTQLTQLGGVYRAMPWLTFGFLLAAFSLAGFPPLSGFWGKFLVIKASLAAELYW---L 407
             + ++   GGV   MP      LL   +  G P  +GF G+++VI A++ A  +W   L
Sbjct: 352 VHSREIADYGGVVNTMPKFAAFALLFTMANCGLPGTAGFVGEWMVIIAAVKAN-FWIGLL 410

Query: 408 AAIALLVG-LLTIFSMTKIWNEVFWKDAPAALQQETLARSTLGLYALPILVLTLFSLVIG 466
           AA AL+ G   +++   +++      D   AL  +  AR  L L      VL L  L +G
Sbjct: 411 AASALIFGAAYSLWMYKRVYLGSVGNDNVKAL-VDINAREFLVLG-----VLALAVLYMG 464

Query: 467 LAAQPFYQFATLAAEQLLTPTA 488
           +  +PF      +  +LL   A
Sbjct: 465 VYPKPFTDVMDASVAELLRHVA 486