Pairwise Alignments

Query, 498 a.a., Na+/H+ antiporter subunit D from Vibrio cholerae E7946 ATCC 55056

Subject, 487 a.a., NADH-quinone oxidoreductase subunit N from Magnetospirillum magneticum AMB-1

 Score =  144 bits (363), Expect = 7e-39
 Identities = 133/499 (26%), Positives = 224/499 (44%), Gaps = 41/499 (8%)

Query: 8   LPVVISLLTAVAIFLAGRNRWLTNGLSVICSVINLFTGALLTITIYTHGPASIAFGQWPA 67
           LP +   +  +A+ + G  R   +  SV   VI L  GA + +     G    AF     
Sbjct: 11  LPEIFMAVAGLALLMLGVFRKEDSTKSVSVLVI-LALGAAMVLVSSLGGERLTAFNG--- 66

Query: 68  PFGIVFVADLLSVGMVMVTAIIGLVSVIYAIADLSAKPSYAR-------YHALLHVLLAG 120
               +FVAD  + G        GLV V  AIA   + P   R       Y  L+     G
Sbjct: 67  ----LFVADRFA-GFAK-----GLVLVASAIATAMSLPYLEREKIGRFEYPVLVLFATLG 116

Query: 121 VYGAFLTGDIFNLYVWFEVMLIASFGLMVLDA-NQQQIDGAIKYVLLNLISTLVFLLSIG 179
           +       D   LY+  E+  +A + L   +  N +  +  +KY +L  +++ + L  I 
Sbjct: 117 MMMMISANDFIALYLGLELQSLALYVLAAYNRDNARATEAGLKYFVLGSLASGLLLYGIS 176

Query: 180 LLYGATGTLNLADL-------HDKAQSLAPEMKTMLAGLL--LFAFSIKAALFPLFAWLP 230
           LLYG  GT +   L       HD    + P M  ++AGL+  L   S K +  P   W P
Sbjct: 177 LLYGFAGTTSFEGLANLFAGGHD--HPIKPNMG-IIAGLVFVLAGLSFKVSAVPFHMWAP 233

Query: 231 ASYHTLPSAIVALFAALLTKVGVYALLRVFTLVFPLDGSGWQPVLLGIAALTMLTGVLGA 290
             Y   P+ + + FA       +  L+RV T  F      W+ V+  IA  +M  G   A
Sbjct: 234 DVYEGAPTPVTSFFAVAPKIAALCLLVRVMTGPFADLVEQWRQVVTFIAIGSMFVGSFAA 293

Query: 291 ASQYDIKKILSFHIISQIGYMIMGLAIYTPLAITGAIFYVIHHILVKGNLFLIGGLIGRK 350
             Q +IK+++++  I  +G++++G+A  + L I G + Y+  ++ +    F +   + +K
Sbjct: 294 VVQTNIKRLMAYSSIGHVGFVLVGIAAGSTLGIQGVLIYLAIYLFMNVGAFAVILSMRQK 353

Query: 351 YGTTQ-LTQLGGVYRAMPWLTFGFLLAAFSLAGFPPLSGFWGKFLVIKASLAAELYWLAA 409
               + +  L G+ +  P + F   +  FS+AG PPL+GFWGKF V  A++ + LY L+ 
Sbjct: 354 GRMVEGIDDLAGLSKTHPMMAFVMAVLMFSMAGVPPLAGFWGKFYVFMAAIESGLYTLSI 413

Query: 410 IALLVGLLTIFSMTKIWNEVFWKDAPAALQQETLARSTLGLYALPILVLTLFSLVIGLAA 469
           + +L  +++ +   +I  +V + D P     + +  S   + A+  +V+  F+L+     
Sbjct: 414 LGVLSSVVSTYYYLRI-VKVMYFDEPVEAFDKPVGTSMTLVMAVSTIVILAFTLI----P 468

Query: 470 QPFYQFATLAAEQLLTPTA 488
            P    A  AA Q+L P A
Sbjct: 469 APLVTSAK-AAAQVLFPAA 486