Pairwise Alignments

Query, 498 a.a., Na+/H+ antiporter subunit D from Vibrio cholerae E7946 ATCC 55056

Subject, 509 a.a., NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  154 bits (389), Expect = 7e-42
 Identities = 123/490 (25%), Positives = 225/490 (45%), Gaps = 52/490 (10%)

Query: 5   GLTLPVVISLLTAVAIFLAGRNRWLTNGLSVICSVINLFTGALLTITIYTHGPASIAFGQ 64
           G+ +P  I+L+T       G   WL  G S+                       S    Q
Sbjct: 24  GVKVPRWIALITMGLTLALGLQLWLQGGYSLT---------------------QSAGIPQ 62

Query: 65  WPAPFGIVFVA----------DLLSVGMVMVTAIIGLVSVIYAIADLSAKPSYARYHALL 114
           W + F + ++           D LS+ MV++T ++G+++V+ +  ++     +  +H  L
Sbjct: 63  WQSEFVLPWIPRFGISIHLALDGLSLLMVVLTGLLGVLAVLCSWREIEKYQGF--FHLNL 120

Query: 115 HVLLAGVYGAFLTGDIFNLYVWFEVMLIASFGLMVL-----DANQQQIDGAIKYVLLNLI 169
             +L GV G FL  D+F  + ++E+ML+  + L+ L        + +I  A K+ +    
Sbjct: 121 MWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQA 180

Query: 170 STLVFLLSIGLL----YGATG--TLNLADLHDKAQSLAPEMKTMLAGLLLFAFSIKAALF 223
           S LV L++I  L    Y ATG  T N  +L +   S   E   ML      AF++K  + 
Sbjct: 181 SGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSHGVEYLLMLG--FFIAFAVKMPVV 238

Query: 224 PLFAWLPASYHTLPSAIVALFAALLTKVGVYALLRVFTLVFPLDGSGWQPVLLGIAALTM 283
           PL  WLP ++   P+A     A +L K   Y LLR    +FP   + + P+ + +  + +
Sbjct: 239 PLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGI 298

Query: 284 LTGVLGAASQYDIKKILSFHIISQIGYMIMGLAIYTPLAITGAIFYVIHHILVKGNLFLI 343
             G   A +QYDIK+++++  +S +G++++ +   + LA  GA+  +I H L    LF++
Sbjct: 299 FYGAWMAFTQYDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFIL 358

Query: 344 GGLIGRKYGTTQLTQLGGVYRAMPWLTFGFLLAAFSLAGFPPLSGFWGKFLVIKASLAAE 403
            G +  +  T  +  +GG++  M WL    +  A +  G P    F G+F+++  S   +
Sbjct: 359 CGQLYERLHTRDMRMMGGLWGKMKWLPALSMFFAVATLGMPGTGNFVGEFMILFGSY--Q 416

Query: 404 LYWLAAIALLVGLL--TIFSMTKIWNEVFWKDAPAALQQETLARSTLGLYALPILVLTLF 461
           +  +  +    GL+  +++S+  +    F K        E    S   L+ + +LV+ L 
Sbjct: 417 VVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASVELPGMSLRELFIILLLVVLL- 475

Query: 462 SLVIGLAAQP 471
            +++G   QP
Sbjct: 476 -VLLGFYPQP 484