Pairwise Alignments

Query, 498 a.a., Na+/H+ antiporter subunit D from Vibrio cholerae E7946 ATCC 55056

Subject, 672 a.a., hydrogenase 4 subunit B from Escherichia coli ECRC62

 Score =  157 bits (396), Expect = 1e-42
 Identities = 123/491 (25%), Positives = 240/491 (48%), Gaps = 32/491 (6%)

Query: 6   LTLPVVISLLTAVA-IFLAGRNRWLTNGLSVICSVINLFTGALLTITIYTHGPASIAFGQ 64
           LT  +++ L  ++A +FL G +R L   LS I S++    G +  IT    G   +A   
Sbjct: 7   LTWSLILYLFASLASLFLLGLDR-LAIKLSGITSLVGGVIGIISGITQLHAGVTLVARFA 65

Query: 65  WPAPFG-IVFVADLLSVGMVMVTAIIGLVSVIYAIADLSAKPSY--ARYHALLHVLLAGV 121
            P  F       D LS  MV+V +++ +V  +Y++  +        A     +++ +A +
Sbjct: 66  TPFDFADFTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNLFIASM 125

Query: 122 YGAFLTGDIFNLYVWFEVMLIASFGLMVLDANQQQIDGAIKYVLLNLISTLVFLLSIGLL 181
               +  + F   V FE+M ++S+ L++   ++  I+  + Y  +    +++ +++  L+
Sbjct: 126 VALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIMIAFLLM 185

Query: 182 YGATGTLNLADLHDKAQSLAPEMKTMLAGLLLFAFSIKAALFPLFAWLPASYHTLPSAIV 241
              +G+L+ A    +  SL+P + + +  L  F F  KA + PL +WLP ++   PS   
Sbjct: 186 GRESGSLDFASF--RTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHAS 243

Query: 242 ALFAALLTKVGVYALLRVFTLVFPLDGSG--WQPVLLGIAALTMLTGVLGAASQYDIKKI 299
           AL + ++ K+G++ +L+V   +    G    W  +++ I A++ L GVL A ++ DIK++
Sbjct: 244 ALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRL 303

Query: 300 LSFHIISQIGYMIM-------GLAIYTPL----AITGAIFYVIHHILVKGNLFLIGGLIG 348
           L++  +  +G +++       GL+++ PL     + GA+F++++H L KG LFL  G I 
Sbjct: 304 LAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAII 363

Query: 349 RKYGTTQLTQLGGVYRAMPWLTFGFLLAAFSLAGFPPLSGF------WGKFLVIKASLAA 402
            +  T  + ++G + + MPW     L+   +++  PPL+GF      W     +    A 
Sbjct: 364 SRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAV 423

Query: 403 ELYWLAAIALLV----GLLTIFSMTKIWNEVFWKDAPAALQQETLARSTLGLYALPILVL 458
            L     IA+++    G L +    K++   F   AP +   E  A+       + +L+L
Sbjct: 424 ALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFC-GAPRSTHAEE-AQEVPNTMIVAMLLL 481

Query: 459 TLFSLVIGLAA 469
               ++I L+A
Sbjct: 482 AALCVLIALSA 492