Pairwise Alignments

Query, 498 a.a., Na+/H+ antiporter subunit D from Vibrio cholerae E7946 ATCC 55056

Subject, 449 a.a., hydrogenase 4, membrane subunit from Escherichia coli BL21

 Score =  154 bits (390), Expect = 5e-42
 Identities = 130/460 (28%), Positives = 222/460 (48%), Gaps = 45/460 (9%)

Query: 33  LSVIC--SVINLFTGA---LLTITIYTHGPASIAFGQWPAPFGIVFVADLLSVGMVMVTA 87
           L+ +C  S+I+ F  A    +T+T+   G  ++        FG+V   D +S  ++ V  
Sbjct: 8   LTTLCMLSLISAFYQADKVAVTLTLVNVGDVAL--------FGLVI--DRVSTLILFVVV 57

Query: 88  IIGLVSVIYAIADLSAKP------SYARYHALLHVLLAGVYGAFLTGDIFNLYVWFEVML 141
            +GL+  IY+   L+ K          RY+A L V +  + G  L+  +    ++FE+  
Sbjct: 58  FLGLLVTIYSTGYLTDKNREHPHNGTNRYYAFLLVFIGAMAGLVLSSTLLGQLLFFEITG 117

Query: 142 IASFGLMVLDANQQQIDGAIKYVLLNLISTLVFLLSIGLLYGATGTLNLADLHDKAQSLA 201
             S+ L+    + +    A+K +L+  I +L   L+   L+  TGT  L+ + +    L 
Sbjct: 118 GCSWALISYYQSDKAQRSALKALLITHIGSLGLYLAAATLFLQTGTFALSAMSE----LH 173

Query: 202 PEMKTMLAGLLLFAFSIKAALFPLFAWLPASYHTLPSAIVALFAALLTKVGVYALLRVFT 261
            + + ++ G +LFA   K+A  P+ AWLP +          L AA + KVGVY   R   
Sbjct: 174 GDARYLVYGGILFAAWGKSAQLPMQAWLPDAMEAPTPISAYLHAASMVKVGVYIFARAI- 232

Query: 262 LVFPLDGSGWQPVLLGI----AALTMLTGVLGAASQYDIKKILSFHIISQIGYMIMGLAI 317
               +DG     V+ G+    A +T+L G L    Q D+K++L++  I+Q+G+M  GL++
Sbjct: 233 ----IDGGNIPHVIGGVGMVMALVTILYGFLMYLPQQDMKRLLAWSTITQLGWMFFGLSL 288

Query: 318 Y---TPLAITGAIFYVIHHILVKGNLFLIGGLIGRKYGTTQLTQLGGVYRAMPWLTFGFL 374
               + LA+ G+I Y+++H   K   FL+ G +    GT  L +L GV   +P    GF 
Sbjct: 289 SIFGSRLALEGSIAYIVNHAFAKSLFFLVAGALSYSCGTRLLPRLRGVLHTLPLPGVGFC 348

Query: 375 LAAFSLAGFPPLSGFWGKFLVIKASLAAEL-YWL---AAIALLVGLLTIFSMTKIWNEVF 430
           +AA ++ G PP +GF+ KF +  A  A  + YW+   A I L++  +  F+    W   F
Sbjct: 349 VAALAITGVPPFNGFFSKFPLFAAGFALSVEYWILLPAMILLMIESVASFAWFIRW---F 405

Query: 431 WKDAPAALQQETLARSTL-GLYALPILVLTLFSLVIGLAA 469
            +  P    +     + L G   L ++VL + SL+  + A
Sbjct: 406 GRVVPGKPSEAVADAAPLPGSMRLVLIVLIVMSLISSVIA 445