Pairwise Alignments

Query, 498 a.a., Na+/H+ antiporter subunit D from Vibrio cholerae E7946 ATCC 55056

Subject, 509 a.a., NADH:ubiquinone oxidoreductase, membrane subunit M from Escherichia coli BL21

 Score =  154 bits (388), Expect = 9e-42
 Identities = 114/422 (27%), Positives = 206/422 (48%), Gaps = 23/422 (5%)

Query: 65  WPAPFGIVF--VADLLSVGMVMVTAIIGLVSVIYAIADLSAKPSYARYHALLHVLLAGVY 122
           W   FGI      D LS+ MV++T ++G+++V+ +  ++     +  +H  L  +L GV 
Sbjct: 71  WIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGF--FHLNLMWILGGVI 128

Query: 123 GAFLTGDIFNLYVWFEVMLIASFGLMVL-----DANQQQIDGAIKYVLLNLISTLVFLLS 177
           G FL  D+F  + ++E+ML+  + L+ L        + +I  A K+ +    S LV L++
Sbjct: 129 GVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIA 188

Query: 178 IGLL----YGATG--TLNLADLHDKAQSLAPEMKTMLAGLLLFAFSIKAALFPLFAWLPA 231
           I  L    Y ATG  T N  +L +   S   E   ML      AF++K  + PL  WLP 
Sbjct: 189 ILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLG--FFIAFAVKMPVVPLHGWLPD 246

Query: 232 SYHTLPSAIVALFAALLTKVGVYALLRVFTLVFPLDGSGWQPVLLGIAALTMLTGVLGAA 291
           ++   P+A     A +L K   Y LLR    +FP   + + P+ + +  + +  G   A 
Sbjct: 247 AHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAF 306

Query: 292 SQYDIKKILSFHIISQIGYMIMGLAIYTPLAITGAIFYVIHHILVKGNLFLIGGLIGRKY 351
           +Q DIK+++++  +S +G++++ +   + LA  GA+  +I H L    LF++ G +  + 
Sbjct: 307 AQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERI 366

Query: 352 GTTQLTQLGGVYRAMPWLTFGFLLAAFSLAGFPPLSGFWGKFLVIKASLAAELYWLAAIA 411
            T  +  +GG++  M WL    L  A +  G P    F G+F+++  S   ++  +  + 
Sbjct: 367 HTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSF--QVVPVITVI 424

Query: 412 LLVGLL--TIFSMTKIWNEVFWKDAPAALQQETLARSTLGLYALPILVLTLFSLVIGLAA 469
              GL+  +++S+  +    F K       QE    S   L+ + +LV+ L  +++G   
Sbjct: 425 STFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLL--VLLGFYP 482

Query: 470 QP 471
           QP
Sbjct: 483 QP 484