Pairwise Alignments

Query, 168 a.a., peptide deformylase from Vibrio cholerae E7946 ATCC 55056

Subject, 172 a.a., Peptide deformylase (EC 3.5.1.88) from Variovorax sp. SCN45

 Score =  143 bits (360), Expect = 2e-39
 Identities = 80/170 (47%), Positives = 110/170 (64%), Gaps = 3/170 (1%)

Query: 1   MAVLEILTAPDPRLRVQSKQVTDV-ASVQTLIDDLLDTLYATDNGIGLAAPQVGREEAIV 59
           MA   IL+ PD RL   +K V  V A ++ L+ D+L+T+Y   NGIGLAA QV   E +V
Sbjct: 1   MAKRIILSYPDKRLHTVAKPVQGVDARIKALVADMLETMYDA-NGIGLAATQVDVHERLV 59

Query: 60  VIDLSDNRDQPLVLINPKVVSGSN-KEMGQEGCLSVPDYYADVERYTSVVVEALDREGKP 118
           VID+S+ R++P+VLINP++   S+ K + +EGCLSVP  Y  V R TSV V+ALD  G+ 
Sbjct: 60  VIDVSEERNEPIVLINPEITWASDEKVLNEEGCLSVPGIYDGVMRSTSVKVQALDENGES 119

Query: 119 LRIETSDFLAIVMQHEIDHLSGNLFIDYLSPLKQQMAMKKVKKHVKNRAR 168
             IE    LA+ +QHE+DHL G +F++YLSPLK+     K+ K  +   R
Sbjct: 120 RSIEADGLLAVCIQHELDHLLGKVFVEYLSPLKRNRIKSKLLKQQREELR 169