Pairwise Alignments

Query, 168 a.a., peptide deformylase from Vibrio cholerae E7946 ATCC 55056

Subject, 173 a.a., Peptide deformylase (EC 3.5.1.88) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  136 bits (342), Expect = 2e-37
 Identities = 78/169 (46%), Positives = 106/169 (62%), Gaps = 3/169 (1%)

Query: 2   AVLEILTAPDPRLRVQSKQVTDVAS-VQTLIDDLLDTLYATDNGIGLAAPQVGREEAIVV 60
           ++L IL  PDPRL   +K V  V   ++ LI+ + +T+Y   NGIGLAA QV   E ++V
Sbjct: 5   SLLPILRYPDPRLHTVAKPVQAVDDRIRVLIERMFETMYDA-NGIGLAATQVDVHERLIV 63

Query: 61  IDLSDNRDQPLVLINPKVVSGS-NKEMGQEGCLSVPDYYADVERYTSVVVEALDREGKPL 119
           ID+S+ RD+ LVLINP++   S  K  G+EGCLSVP  Y  VER  +V V ALD +G   
Sbjct: 64  IDVSEARDERLVLINPEIEWASPEKRKGEEGCLSVPGIYDGVERSIAVRVRALDADGVER 123

Query: 120 RIETSDFLAIVMQHEIDHLSGNLFIDYLSPLKQQMAMKKVKKHVKNRAR 168
            IE    LA+ +QHE+DHL G +F++YLSPLK+     K+ K  +   R
Sbjct: 124 TIEAEGMLAVCIQHEMDHLLGKVFVEYLSPLKRDRIKSKLVKAQREAQR 172