Pairwise Alignments

Query, 168 a.a., peptide deformylase from Vibrio cholerae E7946 ATCC 55056

Subject, 170 a.a., peptide deformylase from Magnetospirillum magneticum AMB-1

 Score =  137 bits (345), Expect = 9e-38
 Identities = 78/165 (47%), Positives = 111/165 (67%), Gaps = 5/165 (3%)

Query: 1   MAVLEILTAPDPRLRVQSKQVTDVAS-VQTLIDDLLDTLYATDNGIGLAAPQVGREEAIV 59
           MAVL ILTAPDP L+ +SK V  V   ++TL+ D+LDT+Y    GIGLAAPQ+G  E ++
Sbjct: 1   MAVLPILTAPDPVLKSKSKPVATVDDRIRTLLADMLDTMYHAP-GIGLAAPQIGVLERVI 59

Query: 60  VIDLSDNRDQ--PLVLINPKVVSGSNKEMG-QEGCLSVPDYYADVERYTSVVVEALDREG 116
           V+D+    +   P+ ++NP++V  S+++   +EGCLSVP++Y++V R  SV V  LD  G
Sbjct: 60  VMDIGRKEEDRAPIRMVNPEIVWASDEDNTYEEGCLSVPEHYSNVVRPASVKVRYLDETG 119

Query: 117 KPLRIETSDFLAIVMQHEIDHLSGNLFIDYLSPLKQQMAMKKVKK 161
               I     LA V+QHE+DHL G LFID+LS LK+ M ++K+ K
Sbjct: 120 AKQEILADGLLATVVQHEMDHLDGILFIDHLSSLKRNMILRKLLK 164