Pairwise Alignments

Query, 168 a.a., peptide deformylase from Vibrio cholerae E7946 ATCC 55056

Subject, 170 a.a., polypeptide deformylase from Agrobacterium fabrum C58

 Score =  134 bits (336), Expect = 1e-36
 Identities = 75/165 (45%), Positives = 108/165 (65%), Gaps = 5/165 (3%)

Query: 1   MAVLEILTAPDPRLRVQSKQVTDV-ASVQTLIDDLLDTLYATDNGIGLAAPQVGREEAIV 59
           M +  ++  PDP LR QSK +  V A V  L DD+L+T+Y    GIGLAA Q+G    ++
Sbjct: 1   MTIKPLIILPDPVLRQQSKLIEQVDAEVLRLADDMLETMYDAP-GIGLAAIQIGVPRRML 59

Query: 60  VIDLSDNRDQ--PLVLINPKVVSGSNK-EMGQEGCLSVPDYYADVERYTSVVVEALDREG 116
           VID++   ++  P+V INP+++  S+     +EGCLS+PDYYA+VER  S+ V+ + R+G
Sbjct: 60  VIDVAREGEEKTPVVFINPEILKVSDDISTYEEGCLSIPDYYAEVERPASLTVQYVGRDG 119

Query: 117 KPLRIETSDFLAIVMQHEIDHLSGNLFIDYLSPLKQQMAMKKVKK 161
           K   +E    LA  +QHEIDHL+G LFID++S LK+ M +KK  K
Sbjct: 120 KQQTVEADGLLATCLQHEIDHLNGVLFIDHISRLKRDMVIKKFTK 164