Pairwise Alignments

Query, 713 a.a., C4-dicarboxylate ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 709 a.a., hypothetical protein from Xanthobacter sp. DMC5

 Score =  233 bits (593), Expect = 3e-65
 Identities = 195/669 (29%), Positives = 309/669 (46%), Gaps = 89/669 (13%)

Query: 51  WISAIHFAGFAMICALWYPALPRWRGSKVALAFDVLLALLALACL--------------- 95
           WI A+ F+ F +I A W P   +   S V + F +LL + A+A                 
Sbjct: 49  WI-AVAFSTFQVITAAWSPLASQIVRS-VHVGF-LLLVVFAIAANHKTGTERLVLWGLGI 105

Query: 96  ------IYLMLAEDALYERGVKFVTSDWVFSILAILIVMEMIRRTMGWFIPTLILICLTY 149
                 +Y  +   AL +R     T D V   +A+ +V E  RR MG  +P +    + Y
Sbjct: 106 FSFVVGLYHWVFYAALIQRAGDPSTMDIVVGTIAVALVFEGSRRLMGAALPIMCGGFILY 165

Query: 150 VSVWGKWAGGIFHFPGLSAETLLYRSFYSSEGMFGSIAAISWSFVFMFILFGAFLVRSGV 209
             ++G++              ++ + F  +EG++G+   +S SF+F+FILFGAFL R+G+
Sbjct: 166 -GLFGEYLPAPLDHRPFDYVQVVDQMFLGTEGIYGTPTYVSSSFIFLFILFGAFLERAGM 224

Query: 210 GDYIMDVSRAAAGKVVGGPGFIAVLASGLMGSVSGSSVANTVSTGVITIPMMKKAGFPAR 269
                D++    G   GGP  +AV++S LMG+++GS VAN V+TG  TIP+MK+ G+   
Sbjct: 225 IQLFNDLAMGTVGHAKGGPAKVAVISSALMGTINGSGVANVVTTGQFTIPLMKRFGYKPA 284

Query: 270 FAAGVEAAASTGGQLMPPVMGAGAFIMASYTQIPYVDIVAVSFIPALIYFLSVAFFVRIE 329
           FA  VEA AS GGQ+MPPVMGA AFIMA    +PY  I   + IPA +YF +V   V +E
Sbjct: 285 FAGAVEATASMGGQIMPPVMGAVAFIMAETIDVPYATIATAAVIPAFLYFFTVFAMVHLE 344

Query: 330 AKRMGVQIVTTSQEPFMKVLL-SGWHNLIPLAVLVTLLVVGFTPTYAA--GLSILSVIVA 386
           A + G+  +   + P   + L + W+ ++PLA LV LL  G+TP +A   GL++ ++IV 
Sbjct: 345 AGKDGLSGLPKDKCPNAWLALRNNWYLILPLAALVWLLFSGYTPLFAGTVGLALTALIVL 404

Query: 387 SWFSKNHKMGPKAI------------IEALEQGAKNMATTAVLLVGIGLVINVISTTGIG 434
                   +GP  +               +E G   +AT   +LV I   +      G  
Sbjct: 405 G-APVARLIGPYGLRVVFWIVLGLSAASFVEYGINGVATVIAVLVAILFFVK-----GGR 458

Query: 435 NTFSLMINNWANGDLLTMLVLITLASLVLGMGLPVTAAYIVLGTLSAPALYKLLAESQLV 494
            T  + I + A+G                   LPV  A  ++GT+        +A +   
Sbjct: 459 ETLRISIESMADG---------------ARNALPVGIACALVGTMIGVFTLTGVATTFAT 503

Query: 495 DLMVSGQLPEQAKAIFMLAAPDQLSLLNAPMAAEKAHELISLVPADFVETLLQQSLGLEA 554
            ++  G+      ++F+      ++ L   M        +  +P +++ T       L A
Sbjct: 504 FVVEVGK-----NSLFLSLVLTMIACLILGMG-------LPTIP-NYIITASIAGPALLA 550

Query: 555 IGLALLSAHLIIFWLSQDSNVTPPVCLTAFAAATIAKTPPMRTGFTAWKIAKGLYLVPVL 614
           +G+ L+ +H+ +F+    +++TPPV L AFAAA IA       G+ A +IA   Y+VP +
Sbjct: 551 LGVPLIVSHMFVFYFGIMADLTPPVALAAFAAAPIAGASGQTIGWIATRIAVAGYVVPFM 610

Query: 615 IAYTQLIS-------------WDVATVVTIGIFAIFGTYAMIGAIEGYLEGRLNLLWRLL 661
             Y   +              W    V  + + AI           GYL   LN+L R++
Sbjct: 611 AVYAPALMLQNGDPMADIIGFW--PAVAYVFVKAIVAIILWAATATGYLLAPLNILERII 668

Query: 662 LAVIGVLLV 670
                 LL+
Sbjct: 669 AFSAAALLI 677