Pairwise Alignments

Query, 713 a.a., C4-dicarboxylate ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 650 a.a., hypothetical protein from Xanthobacter sp. DMC5

 Score = 72.4 bits (176), Expect = 7e-17
 Identities = 74/304 (24%), Positives = 131/304 (43%), Gaps = 28/304 (9%)

Query: 197 FILFGAFLVRSGVGDYIMDVSRAAAGKVVGGPGFIAVLASGLMGSVSGSSVANTVSTGVI 256
           F   G  L RSG+ + ++D      G + GG  +  +    L+ + +G   A+ +S G+I
Sbjct: 113 FTFMGLILERSGMAEDLLDTIGQVFGSIRGGLAYAVIFVGALLAATTGVVAASVISMGLI 172

Query: 257 TIPMMKKAGFPARFAAGVEAAASTGGQLMPPVMGAGAFIMASYTQIPYVDIVAVSFIPAL 316
           ++P+M + G+  R A+GV AA+ T  Q++PP +     +MA        D+   +F+P L
Sbjct: 173 SLPIMLRYGYDRRVASGVIAASGTLAQIIPPSL--VLIVMADQLNRSVGDMYEGAFVPGL 230

Query: 317 IYFLSVAFFVRIEAK-----RMGVQI-VTTSQEPFMKVLLSGWHNLIPLAVLVTLLVVGF 370
           +     A ++ I +        G+ +   T ++P  K L S     +  A    L+  G 
Sbjct: 231 LLASLYAVYIFIISSIFPNAAPGLPLEAQTLRDPEQKTLPSRIMGAVAAAGFAFLIARGS 290

Query: 371 TPTYAAGLSILSVIVASW-----------FSKNHKMGPKAIIEALE---QGAKNMATTAV 416
            P   AG       +A W            S   K+   ++  AL     GA  +   + 
Sbjct: 291 LPGLTAGALPGVANMAVWGIGSFVVLFFIMSGTAKLLTPSLFIALALSIAGAIELMEMSH 350

Query: 417 LLVGIGLVINVISTTGIGNTFSLMINNWANGDLLTMLVLITLA-SLVLGMGLPVTAAYIV 475
           +  G   V+  +S T +G  F + + N     +  + +L  LA  +V  M  P+   ++V
Sbjct: 351 VKFGADYVVLTMSAT-VGIAFVVAVIN----RVFRLKLLSKLAEQVVFVMVPPLALIFLV 405

Query: 476 LGTL 479
           LGT+
Sbjct: 406 LGTI 409