Pairwise Alignments

Query, 713 a.a., C4-dicarboxylate ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 426 a.a., C4-dicarboxylate ABC transporter permease from Pseudomonas simiae WCS417

 Score = 99.4 bits (246), Expect = 3e-25
 Identities = 81/314 (25%), Positives = 147/314 (46%), Gaps = 18/314 (5%)

Query: 182 MFGSIAAISWSFVFMFILFGAFLVRSGVGDYIMDVSRAAAGKVVGGPGFIAVLASGLMGS 241
           +F +  A ++  +  F+L GAF+   GV   ++D + A  G + GG    AVLA  L  +
Sbjct: 47  LFETSDAYTFLAIPFFLLSGAFMTTGGVAQRLIDFANACVGHIRGGLAIAAVLACMLFAA 106

Query: 242 VSGSSVANTVSTGVITIPMMKKAGFPARFAAGVEAAASTGGQLMPPVMGAGAFIMASYTQ 301
           +SGSS A   + G I +  M ++G+P  F AG+   A T G L+PP +    +  A+ T 
Sbjct: 107 LSGSSPATVAAVGSIAVAGMVRSGYPKAFGAGIICNAGTLGILIPPSIVMVVYSAATETS 166

Query: 302 IPYVDIVAVSFIPALI--YFLSVAFFVRIEAKRMGVQIVTTSQEPFMKVLLSGWHNLIPL 359
           +  + +  V  IP L+    L +A ++    K++  Q   T +E       + W  L+ +
Sbjct: 167 VGKLFMAGV--IPGLLLGLMLMIAIYIVARIKKLPAQPRATFREWLTSARRAFWGLLLLV 224

Query: 360 AVLVTLLVVGFTPTYAAGL-SILSVIVASWFSKNHKMG--PKAIIEALEQGAKNMATTAV 416
            +L  +    FTPT AA + ++ S  VA +  K+ ++   PK ++E     +  +A   +
Sbjct: 225 IILGGIYSGMFTPTEAAAVAAVYSAFVALFIYKDMQLRDCPKVLLE-----SGRLAIMLM 279

Query: 417 LLVGIGLVINVISTTGIGNTFSLMINNWANGDLLT---MLVLITLASLVLGMGLPVTAAY 473
            ++   ++   + TT         I  W   + LT    L+++ +  L+ G  +  +A  
Sbjct: 280 FIIANAMLFAHVLTT---EQIPQEITAWVLSEGLTPIGFLIMVNVVLLIAGSFMEPSAIV 336

Query: 474 IVLGTLSAPALYKL 487
           ++L  +  P   KL
Sbjct: 337 LILAPIFFPIAMKL 350