Pairwise Alignments

Query, 713 a.a., C4-dicarboxylate ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 433 a.a., TRAP dicarboxylate transporter, DctM subunit, unknown substrate 3 from Variovorax sp. SCN45

 Score = 85.1 bits (209), Expect = 6e-21
 Identities = 80/313 (25%), Positives = 138/313 (44%), Gaps = 23/313 (7%)

Query: 185 SIAAISWSFVFMFILFGAFLVRSGVGDYIMDVSRAAAGKVVGGPGFIAVLASGLMGSVSG 244
           ++   ++  + MF+L GA +  SGV   +   + +  G + GG G   V+A G   ++ G
Sbjct: 56  TVTDYTFGVIPMFMLMGALVSVSGVSRELFKAANSMIGHLRGGLGVATVVACGGFAAICG 115

Query: 245 SSVANTVSTGVITIPMMKKAGFPARFAAGVEAAASTGGQLMPPVMGAGAFIMASYTQIPY 304
           SSVA   +   +  P M++  +P  F+ GV AA  T G ++PP     + ++A Y  +  
Sbjct: 116 SSVATAATFSAVAYPEMRRFNYPQSFSTGVIAAGGTLGAILPP-----STVLAVYAILTQ 170

Query: 305 VDI-------VAVSFIPALIYFLSVAFFVRIEAKRM-GVQIVTTSQEPFMKVLLSGWHNL 356
            DI       +    +   +Y +++A  V++    + G +I   S+   +K L + W  L
Sbjct: 171 QDIGKLFMAGIVPGILAMAMYVMTIAIIVKLRPDWLPGGEIKPWSER--VKDLKNVWAPL 228

Query: 357 IPLAVLVTLLVVG-FTPTYAAGLSILSVIVASWFSKNHKMGPKAIIEALEQGAKNMATTA 415
           +    ++  L  G FTPT A G+      +     +    GPK I EAL    +  A   
Sbjct: 229 VLFVFVIGGLYGGFFTPTEAGGVGASGAFILG-LVRRKLDGPK-IREALLSATRTAAAVF 286

Query: 416 VLLVGIGLVINVISTTGIGNTFSLMINNWANGDLLTMLVLITLASLVLGMGLPVTAAYIV 475
            +L+G  L    ++ T      +  +     G    +L LI L  LVLG  +   A  I 
Sbjct: 287 TVLIGALLFGYFLTITQSPQKLTEFLTGLGIG-RYGVLALIMLMYLVLGCLMDAMAMII- 344

Query: 476 LGTLSAPALYKLL 488
              L+ P +Y ++
Sbjct: 345 ---LTVPIIYPVI 354