Pairwise Alignments

Query, 713 a.a., C4-dicarboxylate ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 509 a.a., TRAP transporter large permease subunit from Variovorax sp. OAS795

 Score = 63.2 bits (152), Expect = 3e-14
 Identities = 54/239 (22%), Positives = 107/239 (44%), Gaps = 19/239 (7%)

Query: 197 FILFGAFLVRSGVGDYIMDVSRAAAGKVVGGPGFIAVLASGLMGSVSGSSVANTVSTGVI 256
           F   GA L + G+ + ++D      G V GG G+  ++   ++G+++G+     ++  +I
Sbjct: 72  FTFMGAILEKCGLAEDMLDSMGQLFGTVKGGLGYSVIIVGFILGAITGTVAGQVIAMALI 131

Query: 257 TIPMMKKAGFPARFAAGVEAAASTGGQLMPPVMGAGAFIMASYTQIPYVDIVAVSFIPAL 316
           ++P+M + G+  R+A GV AA+ T  QL+PP +     +MA        D+   ++ P++
Sbjct: 132 SLPVMIRYGYNMRYATGVLAASGTITQLVPPSL--VLIVMADQLGRSVGDMYRGAWGPSI 189

Query: 317 IYFLSVA--FFVRIEAKRMGVQIVTTSQEPF--MKVLLSGWHNLIPLAVLVTLLVVGF-- 370
           +  L  A   F+    K   +  +  S       K+       +IP A+L+  ++     
Sbjct: 190 LQVLIFAGYTFMLGVIKPNHIPGIPKSARTLSGAKLWAKCLRGIIPSAILIFAVLGSMGG 249

Query: 371 ---------TPTYAAGLSILSVIVASWFSKNHKMGPKAIIEALEQGAKNMATTAVLLVG 420
                    TPT A  + ++  ++ +   K   +G   I EA+    +  A    +L+G
Sbjct: 250 LPGIDTAIATPTEAGAMGVVGALILAAIHKRLTLG--LIWEAMVGTMRLTAMVVFILIG 306