Pairwise Alignments

Query, 713 a.a., C4-dicarboxylate ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 464 a.a., TRAP transporter large permease from Variovorax sp. OAS795

 Score = 75.9 bits (185), Expect = 4e-18
 Identities = 89/389 (22%), Positives = 163/389 (41%), Gaps = 71/389 (18%)

Query: 197 FILFGAFLVRSGVGDYIMDVSRAAAGKVVGGPGFIAVLASGLMGSVSGSSVANTVSTGVI 256
           FIL G  +  +G+   I + + A  G + GG G + VL S +   +SG+++A+    G I
Sbjct: 58  FILAGNLMNNAGITTRIYNFALALVGWLKGGLGHVNVLGSVIFAGMSGTAIADAAGLGTI 117

Query: 257 TIPMMKKAGFPARFAAGVEAAASTGGQLMPPVMGAGAFIMASYTQIPYVDIVAV--SFIP 314
            I  MK+ G+   FA GV AA++T G ++PP +    + M +   +  + +  +    + 
Sbjct: 118 EIKAMKEHGYSTEFAVGVTAASATLGPIIPPSLPFVIYGMMANVSVGALFLAGILPGALL 177

Query: 315 ALIYFLSVAFFVRIEAKRMGVQIVTTSQEPFMKVL-----LSGWHNLI------------ 357
           A++  L+VA+F         V+  +T    F K +     + GW  LI            
Sbjct: 178 AILMMLTVAYFAHRNGWGGDVKFSSTR---FFKAMCELAVVIGWPLLIWLLVSKLGTPPQ 234

Query: 358 ---------------------PLAVLVTLLVVG------FTPTYAAGLSILSVIVA--SW 388
                                 L ++  +L++G      FTPT  A  + +  ++   +W
Sbjct: 235 LTVFAGLASLFVLDRIFKFEALLPIMTPVLLIGGMSTGLFTPTEGAIAACVWAMILGFAW 294

Query: 389 F-SKNHKMGPKAIIEALEQGAKNMATTAVLLVGIGLVIN-VISTTGIGNTFSLMINNWAN 446
           + + + KM  K  ++ +E       +T + +V    +   +++ TG+    +  I +W  
Sbjct: 295 YKTLSWKMFVKVCLDTIE-----TTSTVLFIVAAASIFGWMLTATGV----TTDIASWVL 345

Query: 447 G---DLLTMLVLITLASLVLGMGLPVTAAYIVLGTLSAPALYKLLAES------QLVDLM 497
           G   +    L+L  L  L +G  L  TAA  +L  +  P   +L  +        +++LM
Sbjct: 346 GFTKEAWVFLLLANLLMLFVGCFLEPTAAITILVPILLPIATQLGVDPIHFGLVMVLNLM 405

Query: 498 VSGQLPEQAKAIFMLAAPDQLSLLNAPMA 526
           +    P     +F+LA    LS     MA
Sbjct: 406 IGLLHPPMGMVLFVLARVAGLSFERTTMA 434