Pairwise Alignments

Query, 713 a.a., C4-dicarboxylate ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 854 a.a., DUF3394 domain-containing protein from Vibrio cholerae E7946 ATCC 55056

 Score =  218 bits (554), Expect = 1e-60
 Identities = 185/671 (27%), Positives = 316/671 (47%), Gaps = 67/671 (9%)

Query: 2   SNSVEQELEKFEVPTRTRFGWVTRTISVLCVLLSLAHIWFNT-------LSTWSELWISA 54
           S  V++ + + +   R   G   R +  + +  SL  +W+ +           ++    +
Sbjct: 8   SQDVQEMVAQADTGARAPKGLPGRVLWFVPLCWSLFQLWYASPLPFIFDFGVLNDTQARS 67

Query: 55  IHFAGFAMICALWYPALPRWRGSKVALAFDVLLALLALACLIYLMLAEDALYERGVKFVT 114
           IH      +    YPA+      ++ L  D LLAL       Y+ L    L  R      
Sbjct: 68  IHLTFAVFLAFTAYPAMKGSPRDRIPLT-DWLLALAGSFSAAYIYLFYAELAGRSGAPTQ 126

Query: 115 SDWVFSILAILIVMEMIRRTMGWFIPTLILICLTYV--SVWGKWAGGIFHFPGLSAETLL 172
            D + S++ +++++E  RR +G   P L+++   ++  +  G +   +    G S    +
Sbjct: 127 FDVIASVVGMVLLLEATRRALG---PPLMMVAALFLLYTFAGPYMPDVIAHKGASLNKAM 183

Query: 173 YRSFYSSEGMFGSIAAISWSFVFMFILFGAFLVRSGVGDYIMDVSRAAAGKVVGGPGFIA 232
              + ++EG+FG    +S SFVF+F+LFGA L R+G G Y + V+ +  G + GGP   A
Sbjct: 184 SHLWLTTEGVFGVALGVSTSFVFLFVLFGAMLERAGAGAYFIKVAFSMLGHMRGGPAKAA 243

Query: 233 VLASGLMGSVSGSSVANTVSTGVITIPMMKKAGFPARFAAGVEAAASTGGQLMPPVMGAG 292
           V+ASGL G VSGSS+AN V+TG  TIP+MK+ GFP   A  VE AAST GQL PP+MGA 
Sbjct: 244 VVASGLSGLVSGSSIANVVTTGTFTIPLMKRVGFPGTKAGAVEVAASTNGQLTPPIMGAA 303

Query: 293 AFIMASYTQIPYVDIVAVSFIPALIYFLSVAFFVRIEAKRMGVQ-IVTTSQEPFMKVLLS 351
           AF+M  Y  I YV+++  + +PALI ++++ + V +EA + G+  +    Q    + LLS
Sbjct: 304 AFLMVEYVGISYVEVIKAAILPALISYIALIYIVHLEACKAGMSGLPRRHQSTVAQKLLS 363

Query: 352 GWHNLIPLAVLVTLLVVGFTPTYA----AGLSILSVIVASWFSKNHKMGPKAIIEALE-- 405
               ++ L V+  ++  G   T      A   IL+V++ + +    K+      E L   
Sbjct: 364 FTATILGLCVISAVVYYGIGWTKEAFGDAATPILTVVLLAAYVGLVKISAPYAKEGLGID 423

Query: 406 ---QGAKNMATTAVLLVGIGLVINVISTTGIGNTFSLMINN-WANGDLLTMLV------- 454
              Q   ++A T    +   L I V+        FS  ++  WA+  ++ +L+       
Sbjct: 424 ENLQYVPDVAPTLKSGLHYLLPIVVLVWCLTVERFSPGLSAFWASVFMIFILLTQRPLMA 483

Query: 455 ----------------------LITLASLVLGMGLPVTAAYIVLGTLSAPALYKLLAESQ 492
                                 L++ A  ++G+G+   AA  V+G ++   +   L  + 
Sbjct: 484 LFNRTGSLGDAAKEGVTDLLESLVSGARNMIGIGVATAAAGTVVGVVTLTGIG--LVMTD 541

Query: 493 LVDLMVSGQLPEQAKAIFMLAAPDQLSL-LNAPMAAEKAHELISLVPADFVETLLQQSLG 551
            V+ +  G L      + ML     +SL L   +     + ++S + A  + TL  +   
Sbjct: 542 FVEFISGGNL------MLMLIFTAVISLILGMGLPTTANYIVVSTLMAPVIVTLGAE--- 592

Query: 552 LEAIGLALLSAHLIIFWLSQDSNVTPPVCLTAFAAATIAKTPPMRTGFTAWKIAKGLYLV 611
              + + L++ HL +F+    ++ TPPV L AFAAA IAK+ P+RTG   +       ++
Sbjct: 593 -HGLIIPLIAVHLFVFYFGILADDTPPVGLAAFAAAAIAKSDPIRTGIQGFAYDIRTAIL 651

Query: 612 PVLIAY-TQLI 621
           P +  + TQL+
Sbjct: 652 PFMFVFNTQLL 662