Pairwise Alignments

Query, 713 a.a., C4-dicarboxylate ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 426 a.a., TRAP transporter large permease from Pseudomonas segetis P6

 Score = 76.6 bits (187), Expect = 2e-18
 Identities = 71/357 (19%), Positives = 156/357 (43%), Gaps = 22/357 (6%)

Query: 184 GSIAAISWSFVFMFILFGAFLVRSGVGDYIMDVSRAAAGKVVGGPGFIAVLASGLMGSVS 243
           G +   S   +  F+L GA +   G+   ++  +    G V GG   + ++AS   G++S
Sbjct: 48  GGVNKFSLLAIPFFVLAGAIMAEGGMSRRLVAFASVLVGFVRGGLSLVNIVASAFFGAIS 107

Query: 244 GSSVANTVSTGVITIPMMKKAGFPARFAAGVEAAASTGGQLMPPVMGAGAFIMASYTQIP 303
           GSSVA+T S G + IP M + G+P  F+  V  + S    L PP   +  + +A+   + 
Sbjct: 108 GSSVADTASVGSVLIPEMARKGYPREFSTAVTVSGSVQALLTPPSHNSVLYSLAAGGTVS 167

Query: 304 YVDIVAVSFIPALIYFLSVAFFVRIEAKRMGV---QIVTTSQEPFMKVLLSGWHNLIPLA 360
              +      P ++    +     I A+R      +++   Q   +K+ +     L+ + 
Sbjct: 168 ISALFIAGIGPGILLTCVMMGMCLIFARRRNYPKGEVIPLKQA--LKICVDALWGLMTMF 225

Query: 361 VLVTLLVVG-FTPTYAAGLSIL-SVIVASWFSKNHKMGPKAIIEALEQGAKNMATTAVLL 418
           +++  ++ G FT T +A ++++ +  V  +  +++K     + + + +  + ++   +L+
Sbjct: 226 IIIGGILSGVFTATESAAIAVVWAFFVTMFIYRDYKW--HELPKLMHRTVRTLSIVMILI 283

Query: 419 ---VGIGLVINVISTTGIGNTFSLMINNWANGDLLTMLVLITLASLVLGMGLPVTAAYIV 475
                 G ++ ++       T  L +++    +   +L+ I    LVLG  + +    ++
Sbjct: 284 AFAASFGYIMTLMQIPAKITTAFLTLSD----NRYVILMCINAMLLVLGTLMDMAPLILI 339

Query: 476 LGTLSAPALYKL------LAESQLVDLMVSGQLPEQAKAIFMLAAPDQLSLLNAPMA 526
           L  +  P +  L           LV+L +    P     +F+ AA  ++++ N   A
Sbjct: 340 LTPILMPVITGLGIDPVHFGMIMLVNLGIGLITPPVGAVLFVGAAVGKVTIENTVKA 396