Pairwise Alignments

Query, 713 a.a., C4-dicarboxylate ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 432 a.a., TRAP-type C4-dicarboxylate transport system, large permease component from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score = 79.7 bits (195), Expect = 3e-19
 Identities = 76/317 (23%), Positives = 142/317 (44%), Gaps = 18/317 (5%)

Query: 174 RSFYSSEGMFGSIAAISWSFVFMFILFGAFLVRSGVGDYIMDVSRAAAGKVVGGPGFIAV 233
           ++FY+  G +  +A      + MF+L G+   RSGV   +++ + A  G+  G    +A+
Sbjct: 49  QNFYAGLGKYPLLA------IPMFVLVGSIFDRSGVALRLVNFAVAIVGRGPGMLPLVAI 102

Query: 234 LASGLMGSVSGSSVANTVSTGVITIPMMKKAGFPARFAAGVEAAASTGGQLMPPVMGAGA 293
           + +  +G +SGS  AN  + G + I  M +AG+P  F+A V  AA+    L+PP +   A
Sbjct: 103 VVAMFLGGISGSGPANAAAVGGVMIAAMARAGYPGSFSASVVGAAAATDILIPPSV---A 159

Query: 294 FIMASYTQIPYVDI---VAVSFIPALI--YFLSVAFFVRIEAKRMGVQIVTTSQEPFMKV 348
           FI+ S   +P   +    A   +P ++    L V         +MG       + PF K 
Sbjct: 160 FIIYS-VLVPGASVPALFAAGMVPGVLAGIALIVPAVWLARKHKMGALEAAMPRPPFWKS 218

Query: 349 LLSG-WHNLIPLAVLVTLLVVGFTPTYAAGLSILSVIVASWFSKNHKMGPKAIIEALEQG 407
           L    W    P+ +L  +    FTPT AA +++   +       +  +  + +   L + 
Sbjct: 219 LREALWGLAAPVLILGGMRAGWFTPTEAAVVAVFYGLFVGMVI-HRTIAVRDLFPILREA 277

Query: 408 AKNMATTAVLLVGIGLVINVISTTGIGNTFSLMINNWANGDLLTMLVLITLASLVLGMGL 467
            +      +++   G+    +ST G+ +  +  I N   G+   +L L+ L  + +GM L
Sbjct: 278 GELSGIILLVVSLAGIFAFSLSTLGVIDPVANAIVNSGLGE-YGVLSLLILLLITVGMFL 336

Query: 468 PVTAAYIVLGTLSAPAL 484
              + +++   L  P +
Sbjct: 337 DGISIFLIFVPLLMPIM 353