Pairwise Alignments

Query, 713 a.a., C4-dicarboxylate ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 613 a.a., TRAP dicarboxylate transporter, DctM subunit, unknown substrate 6 from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score = 66.2 bits (160), Expect = 4e-15
 Identities = 55/216 (25%), Positives = 102/216 (47%), Gaps = 21/216 (9%)

Query: 182 MFGSIAAISWSFVFMFILFGAFLVRSGVGDYIMDVSRAAAGKVVGGPGFIAVLASGLMGS 241
           + G +A  +   V  F L G  L RSG+ + ++D      G + GG     V    ++ +
Sbjct: 59  LIGIMANDTLLAVPFFTLMGLILERSGMAEDLLDTVGQVFGPMRGGLALAVVFVGAMLAA 118

Query: 242 VSGSSVANTVSTGVITIPMMKKAGFPARFAAGVEAAASTGGQLMPPVMGAGAFIMASYTQ 301
            +G   A+ +S G+I++P+M + G+  +F++GV AA+ T  Q++PP +     IMA    
Sbjct: 119 TTGVVAASVISMGLISLPIMLRYGYDRQFSSGVIAASGTLAQIIPPSL--VLIIMADQLG 176

Query: 302 IPYVDIVAVSFIPA-------LIYFLSVAFFVRIEAKRMGVQIVTTSQEPFMKVLLSGWH 354
               D+   +FIPA       ++Y   +A F     K   V  + T    + +   SG +
Sbjct: 177 RSVGDMYKGAFIPAFMLVGCYVLYIACLAIF-----KPASVPALPTEARIYREPDGSGGY 231

Query: 355 N----LIPLAVLVTLLVVGFTP---TYAAGLSILSV 383
                L+ ++ +V++++  + P   T+  G  + SV
Sbjct: 232 QSLLVLMVISFMVSIVLARYMPEVHTWWLGHEVTSV 267