Pairwise Alignments

Query, 713 a.a., C4-dicarboxylate ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 431 a.a., TRAP dicarboxylate transporter, DctM subunit, unknown substrate 3 from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score = 96.3 bits (238), Expect = 3e-24
 Identities = 89/340 (26%), Positives = 147/340 (43%), Gaps = 29/340 (8%)

Query: 138 FIPTLILICLTYVSVWGKWAGGIFHFPGLSAETLLYRSFYSSEGM-FGSIAAISWSFVFM 196
           F   L+L+ +        +A G F   G   +  L   F +  GM F   A+   S + +
Sbjct: 3   FAVMLVLMAIRVPIAVSMFAAGTF---GYIYQVGLPPFFNNLNGMAFARFASYDLSVIPL 59

Query: 197 FILFGAFLVRSGVGDYIMDVSRAAAGKVVGGPGFIAVLASGLMGSVSGSSVANTVSTGVI 256
           FIL G F  + G+   +   +    G+  GG    AVLAS   G++ GSSVA   +   +
Sbjct: 60  FILMGNFATQGGISKALFQFAAVVMGRFKGGLAMAAVLASAGFGAICGSSVATAATITSV 119

Query: 257 TIPMMKKAGFPARFAAGVEAAASTGGQLMPPVMGAGAFIMASYTQIPYVDIVAVSFIPAL 316
            +P MK+ G+  R A G  AA  T G L+PP       I A  T+     + A + +P +
Sbjct: 120 ALPEMKRHGYSGRLATGTLAAGGTLGVLIPP--SVPLVIYAILTEQNIAKLFAAAMVPGI 177

Query: 317 I----YFLSVAFFVRIEAKRMGVQIVTTSQEPFMKVLLSGWHNLIPLAVLVTLLVVG--- 369
           I    Y +++A +VR+                  K+ L     ++P+A+ V L+V G   
Sbjct: 178 IAMLGYMIAIAVYVRLVPGH-----APEHDANEQKLTLQALMGVLPIAI-VFLIVFGGIY 231

Query: 370 ---FTPTYAAGLSILSVIVASWFSKNHKMGPKAIIEALEQGAKNMATTAVLLVGIGLVIN 426
              FTPT  AG+   +  VA+ F +        +       A   A   ++ +G  L+ +
Sbjct: 232 GGLFTPTEGAGVGAAATFVAALFKRELTWAKVKL--CFYSTAAASAMIFMIFIGADLMNS 289

Query: 427 VISTTGIGNTFSLMINNWANGDLLTMLVL--ITLASLVLG 464
            ++ T +    + +I  W   D+  ++V+  I L  +VLG
Sbjct: 290 ALALTQVPAQLASVIQGW---DVSPLMVVGGILLFYVVLG 326