Pairwise Alignments

Query, 713 a.a., C4-dicarboxylate ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 427 a.a., C4-dicarboxylate ABC transporter permease from Magnetospirillum magneticum AMB-1

 Score = 86.3 bits (212), Expect = 3e-21
 Identities = 95/377 (25%), Positives = 167/377 (44%), Gaps = 39/377 (10%)

Query: 118 VFSILAILIVMEMIRRTMGWFIPTLILICLTYVSVWGKWAGGIFHFPGLSAETLLYRSFY 177
           +F +L +L++  M         P  I + LT +S        +F F  +  E++  + F 
Sbjct: 6   IFGLLIVLMLTGM---------PISISLGLTVLSF-------LFLFTQVPIESVALKLFT 49

Query: 178 SSEGMFGSIAAISWSFVFMFILFGAFLVRSGVGDYIMDVSRAAAGKVVGGPGFIAVLASG 237
             E     I AI +     FIL G FL   GV   +++ + A  G   GG G   V+A  
Sbjct: 50  GIEKF--EIMAIPF-----FILAGNFLTHGGVARRMINFATAMVGHWYGGLGLAGVMACA 102

Query: 238 LMGSVSGSSVANTVSTGVITIPMMKKAGFPARFAAGVEAAASTGGQLMPPVMGAGAFIMA 297
           L  +VSGSS A  V+ G I +P M K GFP +F AGV   +   G L+PP +    + +A
Sbjct: 103 LFAAVSGSSPATVVAIGSIILPAMVKQGFPNKFGAGVITTSGALGILIPPSLVMVMYAVA 162

Query: 298 SYTQIPYVDIVAVSFIPALIYFL---SVAFFVRIEAKRMGVQIVTTSQEPFMKVLLSGWH 354
           + T +  + +  V  IP L+      +V +++  +     +   T +Q  F     + W 
Sbjct: 163 TNTSVGALFMAGV--IPGLVLATVLGAVTWYIAWKNDYPRLPPATWAQR-FRAFREAIWG 219

Query: 355 NLIPLAVLVTLLVVGFTPTYAAGLS-ILSVIVASWFSKNHKMGPKAIIEALEQGAKNMAT 413
             + + V+  +    FTPT AA +S + + ++A +  K+  M  K + + L   A   A 
Sbjct: 220 LALIVIVIGGIYTGVFTPTEAAAMSAVYAFLIAVFVYKD--MPLKGVGKILLSSASMSAM 277

Query: 414 TAVLLVGIGLVINVISTTGIGNTFSLMINNWANG---DLLTMLVLITLASLVLGMGLPVT 470
              ++    L   V++   I +     I +W  G    ++  L+++ +  LV G  +  +
Sbjct: 278 LLYIITNAVLFSFVLANENIPHA----IADWIVGKELGVIAFLLVVNVLLLVAGNFMEPS 333

Query: 471 AAYIVLGTLSAPALYKL 487
           +  +++  +  P   KL
Sbjct: 334 SIVLIMAPILFPVAMKL 350



 Score = 28.1 bits (61), Expect = 0.001
 Identities = 12/25 (48%), Positives = 17/25 (68%), Gaps = 3/25 (12%)

Query: 657 LWRLLLAVIGVLLV---WPSLPIWI 678
           +W  LLA++G L+V   WP L IW+
Sbjct: 396 VWPWLLAMLGFLMVVTYWPPLSIWL 420



 Score = 25.0 bits (53), Expect = 0.008
 Identities = 28/133 (21%), Positives = 59/133 (44%), Gaps = 6/133 (4%)

Query: 354 HNLIPLAVLVTLLVVGFTPTYAAGLSILSVIVASWFSKNHKMGPKAIIEALEQGAKNMAT 413
           ++ +   +L+ L++ G   + + GL++LS +          +  K +   +E+  + MA 
Sbjct: 2   NSAVIFGLLIVLMLTGMPISISLGLTVLSFLFLFTQVPIESVALK-LFTGIEK-FEIMAI 59

Query: 414 TAVLLVGIGLVINVISTTGIGNTFSLMINNWANGDLLTMLVLITLASLVLGMGLPVTAAY 473
              +L G  L    ++   I N  + M+ +W  G  L  ++   L + V G      A  
Sbjct: 60  PFFILAGNFLTHGGVARRMI-NFATAMVGHWYGGLGLAGVMACALFAAVSGSS---PATV 115

Query: 474 IVLGTLSAPALYK 486
           + +G++  PA+ K
Sbjct: 116 VAIGSIILPAMVK 128