Pairwise Alignments

Query, 713 a.a., C4-dicarboxylate ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 687 a.a., C4-dicarboxylate ABC transporter from Magnetospirillum magneticum AMB-1

 Score =  264 bits (675), Expect = 1e-74
 Identities = 166/539 (30%), Positives = 274/539 (50%), Gaps = 55/539 (10%)

Query: 1   MSNSVEQELEKFEVPTRTRF---GWVTRTISVLCVLLSLAHIWFNTLSTWSELWISAIHF 57
           MS   E++++  E+ T+      G  +R I  + +  S+  I     S  S L + +IH 
Sbjct: 1   MSQQDEKDVDLAEIDTKGEVFGHGVESRGIFWIAIAFSVFQIVTAAYSPLSSLPVRSIHV 60

Query: 58  AGFAMICALWYPALPRWRGSKVALAFDVLLALLALACLIYLMLAEDALYERGVKFVTSDW 117
               ++    Y A+ R    KVA A+   L  L+    +Y ++ E  L +R     T+D 
Sbjct: 61  GFLLLMVFALYAAMGRGNPVKVATAW--ALGGLSFILSLYHLIYEGELVQRSGDPSTTDL 118

Query: 118 VFSILAILIVMEMIRRTMGWFIPTLILICLTYVSVWGKWAGGIFHFPGLSAETLLYRSFY 177
           V   + + +V E  RR MGW +P L L+ + Y + +G+         G   + ++ + F 
Sbjct: 119 VVGTVMVALVFEAARRLMGWALPALCLVFVAYAA-FGEILPAPLGHRGYGFDQIINQYFL 177

Query: 178 SSEGMFGSIAAISWSFVFMFILFGAFLVRSGVGDYIMDVSRAAAGKVVGGPGFIAVLASG 237
            +EG+FG    +S +++F+FILFG+FL ++G+     DV+    G   GGP  +AV+ SG
Sbjct: 178 GTEGIFGIPCYVSATYIFLFILFGSFLEQAGMIRLFTDVALGTVGHTKGGPAKVAVVTSG 237

Query: 238 LMGSVSGSSVANTVSTGVITIPMMKKAGFPARFAAGVEAAASTGGQLMPPVMGAGAFIMA 297
           LMG+++GS +AN V+TG +TIP+MK+ G+ + FA  VEA AS GGQ+MPPVMGA AFIMA
Sbjct: 238 LMGTINGSGIANVVTTGALTIPLMKRFGYRSEFAGAVEATASMGGQIMPPVMGAVAFIMA 297

Query: 298 SYTQIPYVDIVAVSFIPALIYFLSVAFFVRIEAKRMGVQIVTTSQEPFMK-VLLSGWHNL 356
               I Y ++   + IPAL+Y+ S  + V +EA   G+  +   Q P  +  L   W+ +
Sbjct: 298 ETLNISYAEVCKAAAIPALLYYASAIWMVHLEAGIAGLHGMPKDQCPSAQGALRRQWYLM 357

Query: 357 IPLAVLVTLLVVGFTPTYA--AGLSILSVIV----------------------------- 385
           +PLA LV LL+ GFTP ++   GL++ ++++                             
Sbjct: 358 VPLAALVYLLLAGFTPMFSGTVGLALTAIVILGSSIAANIGGMAGRVVFWGVLGIASSAF 417

Query: 386 -----------------ASWFSKNHKMGPKAIIEALEQGAKNMATTAVLLVGIGLVINVI 428
                             ++F +  +   +  +  L +GA++     V    +G +I  +
Sbjct: 418 FKLGINVVVVTVAVLVGVNFFVRGGRETMRMTVRGLVEGARSAVPVGVACTLVGTIIGTM 477

Query: 429 STTGIGNTFSLMINNWANGDLLTMLVLITLASLVLGMGLPVTAAYIVLGTLSAPALYKL 487
           + TGI  +F+  + + + G L   L+L  +ASL+LGMG+P    YI+  +L AP L+K+
Sbjct: 478 TLTGIAGSFTQGLVSMSGGSLFLTLILTMIASLILGMGIPTIPTYIITSSLVAPMLFKM 536