Pairwise Alignments

Query, 713 a.a., C4-dicarboxylate ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 423 a.a., C4-dicarboxylate ABC transporter from Escherichia coli ECOR38

 Score = 89.4 bits (220), Expect = 3e-22
 Identities = 77/304 (25%), Positives = 140/304 (46%), Gaps = 32/304 (10%)

Query: 197 FILFGAFLVRSGVGDYIMDVSRAAAGKVVGGPGFIAVLASGLMGSVSGSSVANTVSTGVI 256
           FIL G  +  +G+ + I+ ++    GK+ GG G   +L S +MG VS S++A+      +
Sbjct: 62  FILLGTLMSYTGIAERILHIANVLVGKMRGGLGVANILVSTMMGGVSASNLADAAMLSRM 121

Query: 257 TIPMMKKAGFPARFAAGVEAAASTGGQLMPPVMGAGAFIMASYTQIPYVDIVAVSFIPAL 316
            +P M++ G+   FAA + A  S    ++PP  G    I      +    +     +P L
Sbjct: 122 MVPEMERKGYNRAFAAAITAGGSLVTPIIPP--GIALIIYGLVADVSIGKMFIAGLVPGL 179

Query: 317 IYFLSVAFFVRIEAKRMGVQIVTTSQEPFMKVLLS---GWHNLIPLAVLVTLLVVG---- 369
           +  + + F V + A++   +    S     +V+ S    W    P   L+  +V G    
Sbjct: 180 LCAVVLMFTVYLVARKTNAKPSRESWPTGKEVVFSLGQAW----PALFLIFAVVGGIRAN 235

Query: 370 -FTPTYAAGLSILSVIVASWFSKNHKMGPKAIIEALEQGAKNMATTAVLLVGIGLVINVI 428
            FTPT A  +++L +++A  F    +M    +++AL + A+  AT +V+LV       ++
Sbjct: 236 IFTPTEAGAVAVL-IVLAIGFFIYREMRISHVVKALGETAR--ATASVMLV-------IM 285

Query: 429 STTGIGNTFSLMINNWANGDLLT--------MLVLITLASLVLGMGLPVTAAYIVLGTLS 480
           ++  +G  FS+     A  + +T         L++I +  L LGM L   A  ++L  L 
Sbjct: 286 ASAALGWIFSMEHAGVAVANFVTSLTENKYMFLLIINILLLTLGMFLEGNAILLILVPLL 345

Query: 481 APAL 484
            P +
Sbjct: 346 KPVV 349