Pairwise Alignments

Query, 713 a.a., C4-dicarboxylate ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 424 a.a., C4-dicarboxylate TRAP transporter large permease protein DctM from Azospirillum sp. SherDot2

 Score = 85.5 bits (210), Expect = 5e-21
 Identities = 86/306 (28%), Positives = 138/306 (45%), Gaps = 40/306 (13%)

Query: 192 SFVFM----FILFGAFLVRSGVGDYIMDVSRAAAGKVVGGPGFIAVLASGLMGSVSGSSV 247
           SFV +    F+L G  +   G+ D I+  S    G + GG G   V  S +   +SG++V
Sbjct: 51  SFVLLCIPGFVLAGNLMNGGGITDQIVLFSNRLVGHIRGGLGLANVTGSMVFAGISGTAV 110

Query: 248 ANTVSTGVITIPMMKKAGFPARFAAGVEAAASTGGQLMPPVMGAGAFIMASYTQIPYVDI 307
           A T S G + IP M+K+G+ A FAA V AAAST G ++PP       I+ + T +    +
Sbjct: 111 AETASIGAVMIPAMRKSGYDAPFAAAVTAAASTVGPIIPP--SVPMIIVGTLTGLSVGKM 168

Query: 308 VAVSFIPALIYFLSVAFFVRIEAKRMGV---------QIVTTSQEPFMKVLLSGWHNLIP 358
                IP L+  + +   V I A+              +V  S+  F       W  L+ 
Sbjct: 169 FMAGAIPGLLLGIGMMLTVWILARARNYPREPWQGFGALVRASRGAF-------WALLMT 221

Query: 359 LAVLVTLLVVGFTPTYAAGLSILSVIVASWF-SKNHKMG--PKAIIEALEQGAKNMATTA 415
             +L  ++   FTPT A+ ++ L   V   F  K  K+   P  ++E+   GA  +    
Sbjct: 222 AIILFGIVGGYFTPTEASIVAALYAFVIGLFVYKGFKLRQLPGILLES-AIGAGGL---- 276

Query: 416 VLLVGIGLVINVISTT-----GIGNTFSLMINNWANGDLLTMLVLITLASLVLGMGLPVT 470
           +LLVG+  V   I T+      I ++   +  N        +++LI +  L++G  +   
Sbjct: 277 ILLVGLANVFGWILTSEQIPQAIASSMLALTTN-----KYLIILLINILLLIVGTFMETI 331

Query: 471 AAYIVL 476
           AA I+L
Sbjct: 332 AALIIL 337