Pairwise Alignments

Query, 713 a.a., C4-dicarboxylate ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 425 a.a., Sialic acid TRAP transporter large permease protein SiaM from Azospirillum sp. SherDot2

 Score = 84.3 bits (207), Expect = 1e-20
 Identities = 70/292 (23%), Positives = 134/292 (45%), Gaps = 6/292 (2%)

Query: 197 FILFGAFLVRSGVGDYIMDVSRAAAGKVVGGPGFIAVLASGLMGSVSGSSVANTVSTGVI 256
           FIL G  +   G+   I++++ +  G + GG GF+ + AS ++ S+SGS++A+T +   +
Sbjct: 62  FILAGELMNAGGISQRIINLAVSLVGHIKGGLGFVTIGASVMLASLSGSAIADTAALATL 121

Query: 257 TIPMMKKAGFPARFAAGVEAAASTGGQLMPPVMGAGAFIMASYTQIPYVDIVAVSFIPAL 316
            IPMM+  G+P   +AG+ A+      ++PP M    F + + T I    +     +P L
Sbjct: 122 LIPMMRDHGYPVPRSAGLIASGGIIAPIIPPSMPFIIFGVTTNTSIS--SLFMAGIVPGL 179

Query: 317 IYFLSVAFFVRIEAKRMGVQI-VTTSQEPFMKVLLSG-WHNLIPLAVLVTLLVVGFTPTY 374
           +  L +        + M V++    S    +K L  G W   +P+ ++  L    FTPT 
Sbjct: 180 LMGLGLIGAWMFVVRDMTVKLQPKASGRERLKALGDGVWALALPVIIIGGLRGGIFTPTE 239

Query: 375 AAGLSILSVIVASWFSKNHKMGPKAIIEALEQGAKNMATTAVLLVGIGLVINVISTTGIG 434
           AA ++ +  +  + F       P+ ++  L Q A+  +T   L     +   +++   + 
Sbjct: 240 AAVVAAVYSLFVALFIYRQVTLPQ-LVPLLVQAARTTSTVMFLCAAALVSSYMVTLADLP 298

Query: 435 NTFSLMINNWANGDLLTMLVLITLASLVLGMGLPVTAAYIVLGTLSAPALYK 486
              + ++        + ML +  L  L +G  + +T   +VLG +  P   K
Sbjct: 299 QQMTELLAPLMGHPKMLMLAIAVLL-LAVGTVMDLTPTILVLGPVLTPLAIK 349