Pairwise Alignments

Query, 713 a.a., C4-dicarboxylate ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 697 a.a., hypothetical protein from Azospirillum sp. SherDot2

 Score =  267 bits (683), Expect = 1e-75
 Identities = 179/582 (30%), Positives = 286/582 (49%), Gaps = 60/582 (10%)

Query: 3   NSVEQELEKFEVPTRTRF-GWVTRTISVLCVLLSLAHIWFNTLSTWSELWISAIHFAGFA 61
           + + Q +++    T   F G+  R + V+ V  S   IW    +  S + + A+H  GF 
Sbjct: 11  SEIRQAIDRENPATVAAFEGFDGRAVFVIAVAFSAFQIWTAAFNPVSTMVVRAVH-VGFL 69

Query: 62  MICALWYPALPRWRGSKVALAFDVLLALLALACLIYLMLAEDALYERGVKFVTSDWVFSI 121
           ++         +    +    +D LL L A    +Y  + E  L +R     T+D +   
Sbjct: 70  LLMTFTLFGFRQTAERRRVPWYDWLLGLTAFGVGLYHYVFEVDLIQRAGDPNTTDLIVGT 129

Query: 122 LAILIVMEMIRRTMGWFIPTLILICLTYVSVWGKWAGGIFHFPGLSAETLLYRSFYSSEG 181
           +A+ +V E  RR MG  +P +  + + Y         G+ H  G   + ++   + S+EG
Sbjct: 130 IAVALVFEAARRIMGLALPIMCGVFIPYALFGRHLPFGLAH-RGYDLDQVIDNLYLSTEG 188

Query: 182 MFGSIAAISWSFVFMFILFGAFLVRSGVGDYIMDVSRAAAGKVVGGPGFIAVLASGLMGS 241
           ++G+   +S S++F+FILFGAFL R+G+     DVS    G   GGP  +AV++SGLMG+
Sbjct: 189 LYGTPTFVSASYIFLFILFGAFLERAGMIKLFNDVSLGLVGHAKGGPAKVAVISSGLMGT 248

Query: 242 VSGSSVANTVSTGVITIPMMKKAGFPARFAAGVEAAASTGGQLMPPVMGAGAFIMASYTQ 301
           ++GS VAN ++TG  TIP+M + G+   FA  VEA AS GGQLMPPVMGA AFIMA    
Sbjct: 249 INGSGVANVLTTGQFTIPLMMRFGYRPAFAGAVEATASMGGQLMPPVMGAAAFIMAETIG 308

Query: 302 IPYVDIVAVSFIPALIYFLSVAFFVRIEAKRMGVQIVTTSQEP-FMKVLLSGWHNLIPLA 360
           +PY ++   + IPA++YF S  + V +EA    +  +   Q P  ++ ++ GW+ ++PLA
Sbjct: 309 VPYSEVAIAAAIPAILYFGSAFWMVHLEAGMRNLVGLPKDQCPSALRAVIEGWYLILPLA 368

Query: 361 VLVTLLVVGFTPTYAAGLSI------------------LSVIVASWFS------------ 390
            L+ LL  GFTP +A  + I                  +++ VA W +            
Sbjct: 369 ALIYLLFSGFTPLFAGVIGIAATAALILGTTIVGTIGPMALRVAFWVAVGMVAAGLWKLG 428

Query: 391 ---------------------KNHKMGPKAIIEALEQGAKNMATTAVLLVGIGLVINVIS 429
                                K  +     ++ ++  GAKN     V    +G++I +++
Sbjct: 429 FRTEHLAFTMVVLLIVPCLLFKGGRQTLVLVVNSIADGAKNAVGVGVACALVGVLIGMMT 488

Query: 430 TTGIGNTFSLMINNWANGDLLTMLVLITLASLVLGMGLPVTAAYIVLGTLSAPALYKLLA 489
            TG+ ++F+  I +W+ G+LL  LVL  +A +VLG GLP TA YI+  +++APAL     
Sbjct: 489 LTGLASSFASTIVDWSGGNLLAALVLTMIACIVLGTGLPTTANYIITASIAAPALL---- 544

Query: 490 ESQLVDLMVSGQLPEQAKAIFMLAAPDQLSLLNAPMAAEKAH 531
            +  V LMVS         +  L  P  L+ L A    +  H
Sbjct: 545 -TMGVPLMVSHMFVFYFGIMADLTPPVALAALAASSICKADH 585