Pairwise Alignments

Query, 713 a.a., C4-dicarboxylate ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 490 a.a., permease component of C4 dicarboxylate transporter from Agrobacterium fabrum C58

 Score = 74.3 bits (181), Expect = 1e-17
 Identities = 89/400 (22%), Positives = 172/400 (43%), Gaps = 34/400 (8%)

Query: 138 FIPTLILICLTYVSVWG-KWAGGIFHFPGLSAETLLYRSFYS-SEGMFGSIAAISWSFVF 195
           F   +I++ L Y   +   + G  F F G+    L    F +  + +FG ++  +   + 
Sbjct: 2   FAALIIVLLLGYPVAFALAFVGFFFGFIGIELGLLPATLFQAIPDRIFGQMSNETLLAIP 61

Query: 196 MFILFGAFLVRSGVGDYIMDVSRAAAGKVVGGPGFIAVLASGLMGSVSGSSVANTVSTGV 255
            F   G  L +SG+ + ++D      G V GG  F  +    ++ + +G   A+ +S G+
Sbjct: 62  FFTFMGLILEKSGMAEDLLDTIGQLFGPVRGGIAFAVIFVGAILAATTGVVAASVISMGL 121

Query: 256 ITIPMMKKAGFPARFAAGVEAAASTGGQLMPPVMGAGAFIMASYTQIPYVDIVAVSFIPA 315
           I++P+M + G+  + AAG  AA+ T  Q++PP +     ++A        D+   + IP 
Sbjct: 122 ISLPIMLRYGYDRKIAAGTIAASGTLAQIIPPSL--VLIVLADQLGRSVGDMYKGALIPG 179

Query: 316 LIYFLSVAFFVRIEAKRMGVQIVTTSQEP----FMKVLLSGWHNLIPLAVLVTLLVVG-- 369
           L+   +   ++ + +     ++     E       K+LL    +L+P  VL+  LV+G  
Sbjct: 180 LMLVGAYTLYIVVTSIISPAKVPALPSEARTLRGSKLLLKVITSLVPPLVLI-FLVLGTI 238

Query: 370 ----FTPTYAAGLSILSVIVASWFSKNHKMGPKAIIEALEQGAKNMATTAVLLVGIGLVI 425
                TPT    +  +  +  +    N K+    I ++L   AK   ++ VLL+ +G  +
Sbjct: 239 FLGIATPTEGGAMGAVGALALA--LANRKLNLGLIQQSLYATAK--LSSFVLLILLGARV 294

Query: 426 NVISTTGI-GNTFSLMINNWANGDLLTMLVLITLASLVLGMGLPVTAAYIVLGTLSAPAL 484
             ++  G+ G+ +   +     G  +  L++  L    L   L       ++  L AP  
Sbjct: 295 FSLTFYGVNGHVWVEHLMTSVPGGEIGFLIVANLLVFFLAFFLDYFELAFIIIPLLAP-- 352

Query: 485 YKLLAESQLVDLMVSGQLPEQAKAIFMLAAPDQLSLLNAP 524
              +A++  +DL+  G          MLA   Q S ++ P
Sbjct: 353 ---VADALGIDLIWFG---------VMLAVNMQTSFMHPP 380