Pairwise Alignments

Query, 713 a.a., C4-dicarboxylate ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 426 a.a., ABC transporter permease from Agrobacterium fabrum C58

 Score = 91.7 bits (226), Expect = 7e-23
 Identities = 80/310 (25%), Positives = 139/310 (44%), Gaps = 13/310 (4%)

Query: 179 SEGMFGSIAAISWSFVFMFILFGAFLVRSGVGDYIMDVSRAAAGKVVGGPGFIAVLASGL 238
           S+ MF S+ +     V +FIL G  + R  V + I D + A  G + GG G + V++S +
Sbjct: 43  SQTMFSSMNSFLLVAVPLFILVGTVMERGRVAERIFDFAEAMVGWLPGGLGHVNVISSVI 102

Query: 239 MGSVSGSSVANTVSTGVITIPMMKKAGFPARFAAGVEAAASTGGQLMPPVMGAGAFIMAS 298
              VSGSSVA+  S G I I  M++ GFP  +A G+    ST   ++PP       I  S
Sbjct: 103 FSGVSGSSVADIASVGAIEIKAMERHGFPKGYAVGMTLCTSTLSSIIPP--SILIVIAGS 160

Query: 299 YTQIPYVDIVAVSFIPALIYFLSVAFFVRIEAKRMGVQIVTTSQEPFMKVLLSGWHNLIP 358
              +    ++    +P L   L+   F    +   G    T     F  V+++G   ++P
Sbjct: 161 IANVSIGTLLIAGLVPGLFIALAFLVFNHFYSVHYGYNPPTPFN--FRLVVVTGLRAILP 218

Query: 359 LAVLVTLLVVG-----FTPTYAAGLSILSVIVASWFSKNHKMGPKAIIEALEQGAKNMAT 413
           + +   +L++G     FTPT AA ++++ V V         +  + + E L   A+   T
Sbjct: 219 M-LTPLILIIGIASGLFTPTEAAAIAVVYVAVLG-VIVYRTLPVRELPEILISTARISGT 276

Query: 414 TAVLLVGIGLVINVISTTGIGNTFSLMINNWANGDLLTMLVLITLASLVLGMGL-PVTAA 472
              +     L   V +  G+    + ++     G +  MLV+     L++G+ +  + A 
Sbjct: 277 ILFIAATSQLAAWVFTFDGLPEQVAELLKAMNLGPMTGMLVIFVFL-LIIGIFMEAIPAM 335

Query: 473 YIVLGTLSAP 482
           +I++  L  P
Sbjct: 336 FILIPVLMPP 345