Pairwise Alignments

Query, 335 a.a., C4-dicarboxylate ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 325 a.a., hypothetical protein from Xanthobacter sp. DMC5

 Score =  141 bits (355), Expect = 3e-38
 Identities = 92/318 (28%), Positives = 148/318 (46%), Gaps = 11/318 (3%)

Query: 10  LLAAITSFGLIGGAYAAEERSYILATASTGGTYYPVGVALATLTKVKLTPSYHFSLSAIS 69
           L AA  S  L     AA      + T  T G YYP+GVA++ +   K+ P    S+ A  
Sbjct: 16  LAAAALSCALAFSPAAARAEFVNVLTGGTSGVYYPLGVAISKVIGEKV-PGTRPSVQATK 74

Query: 70  SAGSGENVKLMNDNEAQFAILQGLYGAWAWAGEGPYAERQNQLRSVSMLWQNVEHFIVRS 129
           ++    N+      E  F +   L    A   E  +     ++R++  ++ N    +   
Sbjct: 75  ASVENLNLMQQGKGEVAFTLADSLADGAAGKEEAGFKAPLTKVRALGGIYPNYIQIVASK 134

Query: 130 DLAPTGTIADLASMKGKKFSIGSKNSGTEFSGRQIMKGVGVD-PDTFNLAYLGYGGSASA 188
           D      I  +A +KGK+ S+G+  SGTE + R I+   G+   D   + YL +  S   
Sbjct: 135 DSG----IKTIADLKGKRLSVGAPKSGTELNARAILNAAGLKYEDLGKIEYLPFAESVEL 190

Query: 189 LQNGTIDGMNTPAGVPVGAVTQAFAAMGNDIKILSFTDEQIKQANGNYNLWTKFDIPANT 248
           ++N  +D     AG+ V ++     A    I ++      I +    Y    K  IPA T
Sbjct: 191 MKNRQLDATLQSAGLGVASIKDL--ANSVPIVVVEVPGTVIDKIGAPY---LKTTIPAGT 245

Query: 249 YPGVDKTITTIAQPNFLAVRTDISEEDVYQLTKAMYENLAFLQGIHKATKDMAIEKAIEG 308
           Y G    + T A PNFL  R+D+ +++VY +TKA+YENL  L   H A K + +  A++G
Sbjct: 246 YEGQSADVATAAVPNFLVTRSDLKDDEVYAITKAIYENLPELAAAHSAAKSITLANAMKG 305

Query: 309 LPMPLHAGAARYYQEVGI 326
            P+  H GA ++++E G+
Sbjct: 306 SPVAFHPGAEKFFKEKGV 323