Pairwise Alignments

Query, 335 a.a., C4-dicarboxylate ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 325 a.a., TRAP transporter solute receptor, TAXI family precursor from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score = 97.4 bits (241), Expect = 4e-25
 Identities = 83/329 (25%), Positives = 135/329 (41%), Gaps = 11/329 (3%)

Query: 1   MKQKRLTQTLLAAITSFGLIGGAYAAEERSYILATASTGGTYYPVGVALATLTKVKLTPS 60
           MK+  L+ + LA   +         A+++   + T    G YY  G A+  L   K    
Sbjct: 1   MKKIPLSLSTLATAAALMTPMAPAQAQQKFMTIGTGGVTGVYYAAGGAICRLVN-KDRAR 59

Query: 61  YHFSLSAISSAGSGENVKLMNDNEAQFAILQG--LYGAWAWAGEGPYAERQNQLRSVSML 118
           +    S  S+ GS  NV  +   E      Q    + A    G+   A     LR+V  +
Sbjct: 60  HGIRCSVESTGGSVFNVNTIKAGELDLGFTQSDVQFNALKGVGQFKDAGAYGDLRAVFAV 119

Query: 119 WQNVEHFIVRSDLAPTGTIADLASMKGKKFSIGSKNSGTEFSGRQIMKGVGVDPDTFNLA 178
                  + R +      I      KGK+F++G+  SGT  S  +++ G+G     F+LA
Sbjct: 120 HPEPFTVVARKE----ANITKFEDFKGKRFNVGNPGSGTRSSMEELLAGMGWKLSDFSLA 175

Query: 179 Y-LGYGGSASALQNGTIDGMNTPAGVPVGAVTQAFAAMGNDIKILSFTDEQIKQANGNYN 237
             L       AL +G IDG     G P   +     + G   K++S T   + +      
Sbjct: 176 SELKADEHGPALCDGKIDGFYYAVGHPSANIQDPTTSCG--AKLVSITGPAVDKLVAEKP 233

Query: 238 LWTKFDIPANTYPGVDKTITTIAQPNFLAVRTDISEEDVYQLTKAMYENLAFLQGIHKAT 297
            + K  +P   YP   +   T      +   +  S E VYQ+ KA+++N    + +H A 
Sbjct: 234 YYAKVTLPGGLYPNNPQPTQTYGVSATVVASSKTSAETVYQVVKAVFDNFDEFKKLHPAL 293

Query: 298 KDMAIEKAI-EGLPMPLHAGAARYYQEVG 325
            ++  E  + +GL  PLH GA ++Y+E G
Sbjct: 294 ANLTPEGMVKDGLSAPLHEGALKFYKEKG 322