Pairwise Alignments

Query, 335 a.a., C4-dicarboxylate ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 322 a.a., TRAP transporter solute receptor, TAXI family precursor from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score = 49.7 bits (117), Expect = 1e-10
 Identities = 67/288 (23%), Positives = 121/288 (42%), Gaps = 51/288 (17%)

Query: 71  AGSGENVKLMNDNEAQFAILQ-------GLYGAWAWAGEGPYAERQNQLRSVSMLWQNVE 123
           AG  E + L+ + EA   I+         L G   + G          LR++++L QN  
Sbjct: 51  AGGIEAIDLVEEGEADLCIVTPAMLMPAALDGRLIFQGRAA-----PHLRALAVLPQNDR 105

Query: 124 HFIVRSDLAPTGTIADLASMKGKKFSIG---SKNSGTEFSG---RQIMKGVGVDPDTFNL 177
             +    L P   I     ++ KK ++    S+N GT F G   R  M+  G+D  TF  
Sbjct: 106 MVLA---LRPDLGIRSFEELRQKKPALRIATSRNDGTNFIGYVARLFMQAHGIDDATF-- 160

Query: 178 AYLGYGG----------SASALQNGTIDGMNTPAGVPVGAVTQAFAAMGNDIKILSFTDE 227
               +GG          S   +Q+G +DG+   A      +T  ++ +    K++    E
Sbjct: 161 --ASWGGTYVEDSNPRESLQRMQDGEVDGVLQEA-----IMTPWWSDIVEAGKVVPLPSE 213

Query: 228 Q--IKQANGNYNLWTKFDIPANTYPGVDKTITTIAQPNFLA-VRTDISEEDVYQLTKAMY 284
           +  ++Q   +Y  + + D+PA  +P +  ++  +   +FL  VR D+ ++  + LT  + 
Sbjct: 214 EAVLQQLQKDYG-FGRNDLPAGYWPSLQTSLPALDFSDFLILVRDDMPDDIAHLLTWCLV 272

Query: 285 ENLAFLQGIHKATKDMA-------IEKAIEGLPMPLHAGAARYYQEVG 325
           E  A ++  ++             +  A+    + LH GA RYY+  G
Sbjct: 273 ETRAAIERQYRHLPPQRSPLSYPLVPSAMAQTSIALHPGARRYYEAAG 320