Pairwise Alignments

Query, 335 a.a., C4-dicarboxylate ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 312 a.a., C4-dicarboxylate ABC transporter from Magnetospirillum magneticum AMB-1

 Score =  144 bits (362), Expect = 4e-39
 Identities = 98/321 (30%), Positives = 158/321 (49%), Gaps = 11/321 (3%)

Query: 6   LTQTLLAAITSFGLIGGAYAAEERSYILATASTGGTYYPVGVALATLTKVKLTPSYHFSL 65
           + + +  A+ +  L   A+AA++   IL T  T G YYP+G AL+++   K  P    ++
Sbjct: 1   MKRVVFGAVLATILAVPAFAADQFLNIL-TGGTSGVYYPLGNALSSIYG-KALPGARVTV 58

Query: 66  SAISSAGSGENVKLMNDNEAQFAILQGLYGAWAWAGEGPYAERQNQLRSVSMLWQNVEHF 125
            A  ++    N+  M   E  F +   L  AW    E  Y     +LR+++ ++ N    
Sbjct: 59  QATKASVENLNLLQMGRGELAFTLGDSLTQAWDGVEEAGYKAPLKKLRTMAAIYPNYIQI 118

Query: 126 IVRSDLAPTGTIADLASMKGKKFSIGSKNSGTEFSGRQIMKGVGVDPDTFNLAYLGYGGS 185
           +  +D      I  LA +KGK+ S+G+  SGTE + R I K  G+      + YL +G S
Sbjct: 119 VATADSG----IKTLADLKGKRVSVGAPKSGTELNARAIFKAAGLAYSDMKVQYLPFGES 174

Query: 186 ASALQNGTIDGMNTPAGVPVGAVTQAFAAMGNDIKILSFTDEQIKQANGNYNLWTKFDIP 245
              ++N  +D     AG+ V ++     A G+DI I++ + E I  A    + +    +P
Sbjct: 175 VELMKNKQLDATLQSAGLGVSSLRD--LATGDDIVIVAISPEVI--AKTGDSAYIASVVP 230

Query: 246 ANTYPGVDKTITTIAQPNFLAVRTDISEEDVYQLTKAMYENLAFLQGIHKATKDMAIEKA 305
           ANTY G    + T A  NFL     +  E VY +TKAM+ N+  L   H A +++    A
Sbjct: 231 ANTYRGQTVDVPTAAVRNFLVTHEGVPAELVYGMTKAMFTNMPDLLAAHSAAREIDPAHA 290

Query: 306 IEGLPMPLHAGAARYYQEVGI 326
            +  P+PLH GA +YY+E G+
Sbjct: 291 AKS-PIPLHPGAEKYYREAGL 310