Pairwise Alignments

Query, 450 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 466 a.a., nitrogen regulation protein NR(I) from Vibrio cholerae E7946 ATCC 55056

 Score =  259 bits (662), Expect = 1e-73
 Identities = 168/461 (36%), Positives = 250/461 (54%), Gaps = 35/461 (7%)

Query: 8   LIEDDDIVRQATGQWLQLAGFDVAMFADGASALAAIEQQSFAAVVSDVRLPDTDGLSLLV 67
           +++DD  +R    + L  A      FAD  S L A+E+++   +VSD+R+P  DG++LL 
Sbjct: 8   VVDDDSSIRWVMEKTLSSAHIKCETFADAESVLLALERETPDVLVSDIRMPGMDGIALLN 67

Query: 68  ALKNVQSLMPVILITGHGDVDMAVKALHQGAFDFIEKPFQPERLANTVAQAVSQYQNALS 127
            +      +PVI++T H D+D AV A  QGAF+++ KPF  +     V +A++  Q    
Sbjct: 68  QVHQRTPELPVIIMTAHSDLDAAVNAYQQGAFEYLPKPFDVDETLTLVERAIAHGQEQRK 127

Query: 128 SQSRAHYLASAKGLEQILIGQCKSIQLLREQIAKVAAMDTNVIIYGETGCGKELVAQCLH 187
           +  R     SA  +    IG+  ++Q +   I +++    +V+I GE+G GKELVA  LH
Sbjct: 128 TSHRPSENYSAPEI----IGEAPAMQEVFRAIGRLSRSSISVLINGESGTGKELVAHALH 183

Query: 188 QASERQRGQFVAINCGAIPENLFESELFGHEAGAFTGAVKRRIGKLELADKGTLFLDEIE 247
           + S R +  F+A+N  AIP++L ESELFGHE GAFTGA   R G+ E A+ GTLFLDEI 
Sbjct: 184 RHSPRAQKPFIALNMAAIPKDLIESELFGHEKGAFTGANTVRQGRFEQANGGTLFLDEIG 243

Query: 248 SMPLAMQVKVLRVLQDHVVERVGSNQPITIDLRVIAAAK---EELRQHAEFRQDLFYRLN 304
            MPL +Q ++LRVL D    RVG +  I +D+R++AA     E+L    +FR+DLF+RLN
Sbjct: 244 DMPLDIQTRLLRVLADGQFYRVGGHVAIKVDVRIVAATHQNLEKLVHQGKFREDLFHRLN 303

Query: 305 VAQLYLPPLRERGDDILLLFEHFCV----QVKPTWRSLSEADRLALLTYRWPGNVRELRN 360
           V ++++P LRER  DI  L +HF      ++    ++L+      L    WPGNVR+L N
Sbjct: 304 VIRIHIPSLRERRQDIEKLTKHFLALAAKELGVEMKTLNPRTVDILTKLDWPGNVRQLEN 363

Query: 361 VALRYALDDSIS-------VGEILA-----------SCPGMTEEEASAGLP------LAI 396
           +     +  S S         E+L+           S     E  A + L       LA 
Sbjct: 364 MCRWLTVMASGSEVLPSDLPSELLSERKASHFDNDISWQKQLETWAKSALASGETELLAY 423

Query: 397 QVHNFERKVIAQALHRHQGNISEVMKELDLPRRTLNQKMQK 437
            +  FER ++  ALH   G+  E  K L   R TL +K+++
Sbjct: 424 ALPEFERILLEAALHHTNGHKQEAAKVLGWGRNTLTRKLKE 464