Pairwise Alignments

Query, 450 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 446 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  383 bits (984), Expect = e-111
 Identities = 215/443 (48%), Positives = 292/443 (65%), Gaps = 15/443 (3%)

Query: 6   IALIEDDDIVRQATGQWLQLAGFDVAMFADGASALAAIEQQSFAAV-VSDVRLPDTDGLS 64
           + LI+D+  +R A  Q  +LA  +   FA    AL AI+ Q    V VSD+ LP   G +
Sbjct: 4   VFLIDDESDIRIALAQSFELADLNAQFFASVEEALLAIKAQGLPLVIVSDICLPGLSGQN 63

Query: 65  LLVALKNVQSLMPVILITGHGDVDMAVKALHQGAFDFIEKPFQPERLANTVAQAVSQYQN 124
           LL ++ +  S +PVILITGHGD+ MAVKA+H GA+DFIEKPF PERL +TV +A+ + + 
Sbjct: 64  LLSSVLHQDSELPVILITGHGDISMAVKAMHDGAYDFIEKPFAPERLIDTVHRAIEKRRL 123

Query: 125 ALSSQSRAHYLASAKGLEQILIGQCKSIQLLREQIAKVAAMDTNVIIYGETGCGKELVAQ 184
            L ++     L  ++ L   +IG+  +IQ LR+ IA+VA    +++++GETG GKELVA+
Sbjct: 124 TLENRQLKRSLKVSQTLGPRIIGETAAIQTLRDTIAQVADTQADILLFGETGTGKELVAR 183

Query: 185 CLHQASERQRGQFVAINCGAIPENLFESELFGHEAGAFTGAVKRRIGKLELADKGTLFLD 244
            LH+ S R+   FVAINCGA+PENL ESEL+GHE GAFTGA  RR+GK E A  GTLFLD
Sbjct: 184 SLHEQSSRREQNFVAINCGAVPENLIESELYGHEKGAFTGADSRRVGKFEHAQGGTLFLD 243

Query: 245 EIESMPLAMQVKVLRVLQDHVVERVGSNQPITIDLRVIAAAKEELRQHA---EFRQDLFY 301
           EIESMP+  Q+++LRVLQ+ V+ER+GSN+ I +D+RVIAA K +L+Q A   +FRQDL+Y
Sbjct: 244 EIESMPMQAQIRLLRVLQERVIERIGSNELIPLDIRVIAATKIDLKQAAAEGKFRQDLYY 303

Query: 302 RLNVAQLYLPPLRERGDDILLLFEHFCVQVKPTW----RSLSEADRLALLTYRWPGNVRE 357
           RLN+  L +PPLRER +DI  LF HF +     +     +L+ +D  +LL++ WPGNVRE
Sbjct: 304 RLNIVTLTIPPLRERREDIPALFHHFLLVAAARYGKAATALTASDVQSLLSHDWPGNVRE 363

Query: 358 LRNVALRYALDDSISVGEILASCPGMTEEEASAGLPLAIQVHNFERKVIAQALHRHQGNI 417
           LRN A RY L     +G++       + E  S  L L  QV  FE+ ++ Q L    G+I
Sbjct: 364 LRNAAERYVL-----LGKLAQFAE--SHEPKSKLLGLNEQVAEFEKSLLEQTLIECGGSI 416

Query: 418 SEVMKELDLPRRTLNQKMQKFGL 440
              M+ L LPR+TL  KMQK+ L
Sbjct: 417 KATMERLHLPRKTLYDKMQKYQL 439