Pairwise Alignments

Query, 450 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 442 a.a., C4-dicarboxylate transport transcriptional regulatory protein from Pseudomonas putida KT2440

 Score =  378 bits (970), Expect = e-109
 Identities = 218/442 (49%), Positives = 274/442 (61%), Gaps = 15/442 (3%)

Query: 6   IALIEDDDIVRQATGQWLQLAGFDVAMFADGASALAAIEQQSFAAVVSDVRLPDTDGLSL 65
           + ++EDD  V     Q L L             AL  I       VVSD+RLP  DGL L
Sbjct: 8   VLIVEDDPHVLLGCQQALALEDIACEGVGSAEQALERIGDDFAGIVVSDIRLPGIDGLEL 67

Query: 66  LVALKNVQSLMPVILITGHGDVDMAVKALHQGAFDFIEKPFQPERLANTVAQAVSQYQNA 125
           L  LK     +PV+LITGHGD+DMAV A+  GA+DF+EKPF PERL + V +A+ Q   +
Sbjct: 68  LNRLKARDRSLPVVLITGHGDIDMAVGAMRNGAYDFMEKPFSPERLVDVVRRALEQRGLS 127

Query: 126 LSSQSRAHYLASAKGLEQILIGQCKSIQLLREQIAKVAAMDTNVIIYGETGCGKELVAQC 185
               +    LA    LE  +IG+  +++ LRE IA VA    NV+I GETG GKELVA+C
Sbjct: 128 REVVALRRQLAEQSSLEGRIIGRSPAMEHLRELIANVADTSANVLIEGETGTGKELVARC 187

Query: 186 LHQASERQRGQFVAINCGAIPENLFESELFGHEAGAFTGAVKRRIGKLELADKGTLFLDE 245
           LH  S RQ   FVA+NCG +PENLFESE+FGHEA AFTGA KRRIGK+E A+ GTLFLDE
Sbjct: 188 LHDFSRRQSHPFVALNCGGLPENLFESEIFGHEANAFTGAGKRRIGKIEHANGGTLFLDE 247

Query: 246 IESMPLAMQVKVLRVLQDHVVERVGSNQPITIDLRVIAAAK---EELRQHAEFRQDLFYR 302
           +ESMP+ +Q+K+LRVLQ+  +ER+GSNQ I +D RVIAA K   + L Q  +FR DL+YR
Sbjct: 248 VESMPINLQIKLLRVLQERTLERLGSNQSIPVDCRVIAATKADLDALGQSGQFRSDLYYR 307

Query: 303 LNVAQLYLPPLRERGDDILLLFEHFCVQVKPTW----RSLSEADRLALLTYRWPGNVREL 358
           LNV  L LPPLRER +DIL LFEHF  Q    +     +L       L+ + WPGNVREL
Sbjct: 308 LNVVTLELPPLRERREDILQLFEHFLQQSALRFDRETPTLDSQTLSRLMAHDWPGNVREL 367

Query: 359 RNVALRYALDDSISVGEILASCPGMTEEEASAGLPLAIQVHNFERKVIAQALHRHQGNIS 418
           RNVA RYAL         L +        A+ GL  A  V  FER ++  AL R  GN+S
Sbjct: 368 RNVAERYALG--------LPAFKKGPSGGANQGLLFAEAVEAFERNLLTDALQRTGGNLS 419

Query: 419 EVMKELDLPRRTLNQKMQKFGL 440
           +  +EL + + TL  K++K+GL
Sbjct: 420 QASQELGMAKTTLFDKVKKYGL 441