Pairwise Alignments

Query, 450 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 451 a.a., sigma-54-dependent Fis family transcriptional regulator from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  263 bits (672), Expect = 9e-75
 Identities = 163/451 (36%), Positives = 252/451 (55%), Gaps = 23/451 (5%)

Query: 6   IALIEDDDIVRQATGQWLQLAGFDVAMFADGASALAAIEQ--QSFAAVVSDVRLPDTDGL 63
           + LI+D++ +RQ   + L+L G+ V    +       +E   +    V+SDV+LPD  GL
Sbjct: 7   LLLIDDENNLRQVLARVLELEGYQVLQAKNAREGFELLENHAEEVEVVLSDVKLPDDHGL 66

Query: 64  SLLVALKNVQSLMPVILITGHGDVDMAVKALHQGAFDFIEKPFQPERLANTVAQAVSQYQ 123
           ++L  +K    L  VIL+T  G +   V A+ QGAFD++ K    E+L  TVA+A  + +
Sbjct: 67  NILRKVKEKYPLPEVILMTAFGTIQDGVSAMKQGAFDYLTKGENDEQLIVTVARAADKAR 126

Query: 124 NALSSQSRAHYLASAKGLEQILIGQCKSIQLLREQIAKVAAMDTNVIIYGETGCGKELVA 183
                 +       AK     +IG   +++  +E  A+VAA D+ V++ GETG GKEL A
Sbjct: 127 -LRKRVAELEKQVEAKFTLDTIIGHTPALKQAKELTARVAATDSTVLLEGETGVGKELFA 185

Query: 184 QCLHQASERQRGQFVAINCGAIPENLFESELFGHEAGAFTGAVKRRIGKLELADKGTLFL 243
           Q +H AS R+   FVA+NC A P++L ESE+FG++ GAFTGA+  + G  E A+ GT+FL
Sbjct: 186 QAIHSASPRRSKPFVAVNCSAFPKDLLESEIFGYKKGAFTGAMADKKGLFEEANGGTIFL 245

Query: 244 DEIESMPLAMQVKVLRVLQDHVVERVGSNQPITIDLRVIAAAKEELRQHAE---FRQDLF 300
           DEI  MP  +Q K LRVL+     ++G  +P+ +++R++AA   +L+  AE   FR DL+
Sbjct: 246 DEIGEMPPELQAKFLRVLETQSFTKLGDTKPVKVNVRIVAATNRDLQAEAEADRFRPDLY 305

Query: 301 YRLNVAQLYLPPLRERGDDILLLFEHFC----VQVKPTWRSLSEADRLALLTYRWPGNVR 356
           YRL+V ++ +P LRER  DI LL +HF     +++      +SE     L  Y W GN+R
Sbjct: 306 YRLSVFKIRVPTLRERQADIPLLAQHFLQLYNLKMNRRLEGMSEEFIQKLKHYPWKGNIR 365

Query: 357 ELRNV---ALRYALDDSIS----VGEILASCPGMTEEEASAGLPLAIQVHNFERKVIAQA 409
           EL+NV   A+  A ++ ++      E   + P +   E+   L         ERK I + 
Sbjct: 366 ELKNVMERAVILADEEKLTPEHLPAEFWTAAPSLEASESDTSL------STVERKHIMKI 419

Query: 410 LHRHQGNISEVMKELDLPRRTLNQKMQKFGL 440
           L +  GN +E  + L +   TL +K+Q++GL
Sbjct: 420 LEQTDGNKTEAARRLHIGLTTLYRKVQEYGL 450