Pairwise Alignments

Query, 450 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 461 a.a., sigma-54-dependent Fis family transcriptional regulator from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  271 bits (694), Expect = 2e-77
 Identities = 176/468 (37%), Positives = 265/468 (56%), Gaps = 35/468 (7%)

Query: 1   MESQ---RIALIEDDDIVRQATGQWLQLAGFDVAMFADGASALAAIEQQSFAAVVSDVRL 57
           ME Q   RI +I+D++ V  +    L+    +V M  +       +  + F  ++ D+  
Sbjct: 1   MEEQNLGRILVIDDNEDVLFSAKMLLRKHAREVVMEKNPKKIPFLLSNEDFDLILLDMNF 60

Query: 58  PD--TDGLSLLVALKNVQSLMP---VILITGHGDVDMAVKALHQGAFDFIEKPFQPERLA 112
               T G      LK V    P   V++IT +GDV+MAVKAL +GA DF+ KP+Q E+L 
Sbjct: 61  SQDITSGQEGFYWLKEVLKYDPSAVVVMITAYGDVEMAVKALKEGATDFVLKPWQNEKLL 120

Query: 113 NTVAQAVS---QYQNALSSQSRAHYLASA-KGLEQILIGQCKSIQLLREQIAKVAAMDTN 168
            T++ A      YQ     +     L++     + I+ G+ K+++ L   I KVA  D +
Sbjct: 121 ATLSAAARLRHSYQEVSRLREANRTLSTQLHSGKDIIQGESKAMRHLFSIIDKVAKTDAD 180

Query: 169 VIIYGETGCGKELVAQCLHQASERQRGQFVAINCGAIPENLFESELFGHEAGAFTGAVKR 228
           +++ GE G GKE++A+ LH+ S R    FV ++ GAI E+LFESELFGH+ GAFT A + 
Sbjct: 181 ILLLGENGTGKEVIARALHERSSRADKVFVTVDMGAITESLFESELFGHKKGAFTDAKED 240

Query: 229 RIGKLELADKGTLFLDEIESMPLAMQVKVLRVLQDHVVERVGSNQPITIDLRVIAAAK-- 286
           R+G++E A+ GTLFLDEI ++  AMQ K+L VLQ   + +VG+N+P+ +++R+I A    
Sbjct: 241 RVGRIEAANGGTLFLDEIGNLSPAMQAKLLTVLQRREIIKVGTNKPVPVNVRLICATNMP 300

Query: 287 -EELRQHAEFRQDLFYRLNVAQLYLPPLRERGDDILLLFEHF----CVQVKPTWRSLSEA 341
            +E+ Q  EFRQDL YR+N  +L LPPLR R DD+ L   HF     V+ K   + LS+A
Sbjct: 301 LKEMVQRGEFRQDLLYRINTVELQLPPLRSRQDDLPLFAAHFLQVYAVKYKQPVKRLSDA 360

Query: 342 DRLALLTYRWPGNVRELRNVALRYAL---------DDSISVGEILASCPGMTEEEASAGL 392
               L +Y WPGNVREL++   R ++         DD   + E  A        EASA  
Sbjct: 361 ALARLKSYSWPGNVRELQHALERASIMSDNRELQPDDFFFLAEEEA-------VEASAVS 413

Query: 393 PLAIQVHNFERKVIAQALHRHQGNISEVMKELDLPRRTLNQKMQKFGL 440
             ++ +   ER+ + +AL +H+GNIS+  KEL L R  L ++++K+ L
Sbjct: 414 AQSLDLDELEREAVQRALQKHEGNISKAAKELGLSRGALYRRLEKYEL 461