Pairwise Alignments

Query, 450 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 445 a.a., Putative sensory histidine kinase YfhA from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  268 bits (686), Expect = 2e-76
 Identities = 167/449 (37%), Positives = 236/449 (52%), Gaps = 23/449 (5%)

Query: 6   IALIEDDDIVRQATGQWLQLAGFDVAMFADGASALAAIEQQSFAAVVSDVRLPDTDGLSL 65
           + L++DD  + +  G  L   G+ V     G   L  + ++    V+SD+R+ + DG+ L
Sbjct: 9   LLLVDDDPGLLKLLGMRLTSEGYSVVTAESGQEGLRVLHREKVDLVISDLRMDEMDGMQL 68

Query: 66  LVALKNVQSLMPVILITGHGDVDMAVKALHQGAFDFIEKPFQPERLANTVAQAVSQYQNA 125
              ++ VQ  MPVI++T HG +  AV A  +G F F+ KP   + L   + +A+ Q   A
Sbjct: 69  FTEIQKVQPGMPVIILTAHGSIPDAVAATQKGVFSFLTKPIDRDALYKAIDEALEQSAPA 128

Query: 126 LSSQSRAHYLASAKGLEQILIGQCKSIQLLREQIAKVAAMDTNVIIYGETGCGKELVAQC 185
                R             ++ +   +  L EQ   VA  D +V+I G++G GKE+ AQ 
Sbjct: 129 TDDSWR-----------NAIVTRSPLMLRLLEQARMVAQSDVSVLINGQSGTGKEIFAQA 177

Query: 186 LHQASERQRGQFVAINCGAIPENLFESELFGHEAGAFTGAVKRRIGKLELADKGTLFLDE 245
           +H AS R    FVAINCGA+PE L ESELFGH  GAFTGAV  R G  + A+ GTLFLDE
Sbjct: 178 IHNASPRSNKPFVAINCGALPEQLLESELFGHARGAFTGAVSNREGLFQAAEGGTLFLDE 237

Query: 246 IESMPLAMQVKVLRVLQDHVVERVGSNQPITIDLRVIAAAKEELRQ---HAEFRQDLFYR 302
           I  MP  +QVK+LRVLQ+  V  +GSN+ I ID+R+I+A   +L +     EFR+DL+YR
Sbjct: 238 IGDMPAPLQVKLLRVLQERKVRPLGSNRDIDIDVRIISATHRDLPKAMARGEFREDLYYR 297

Query: 303 LNVAQLYLPPLRERGDDILLLFEHFCVQV----KPTWRSLSEADRLALLTYRWPGNVREL 358
           LNV  L +P L ER +DI LL  H   Q     KP  R+ S      L+T  WPGNVR+L
Sbjct: 298 LNVVSLKIPALAERTEDIPLLANHLLRQSAQRHKPFVRAFSTDAMKRLMTASWPGNVRQL 357

Query: 359 RNVALR-YALDDSISVGEILASCPGMTEEEASAGLPLAIQVHN-FERKVIAQALHRHQGN 416
            NV  +  AL  S  + + L        E  +  LP   +  N FE   + + L   +GN
Sbjct: 358 VNVIEQCVALTSSPVISDALVE---QALEGENTALPTFAEARNQFELNYLRKLLQITKGN 414

Query: 417 ISEVMKELDLPRRTLNQKMQKFGLLRGDF 445
           ++   +     R    + + +  L   DF
Sbjct: 415 VTHAARMAGRNRTEFYKLLSRHELDANDF 443