Pairwise Alignments

Query, 450 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 441 a.a., fused DNA-binding response regulator in two-component regulatory system with ZraS: response regulator/sigma54 interaction protein (NCBI) from Escherichia coli BW25113

 Score =  265 bits (678), Expect = 2e-75
 Identities = 169/443 (38%), Positives = 260/443 (58%), Gaps = 23/443 (5%)

Query: 8   LIEDDDIVRQATGQWLQLA-GFDVAMFADGASALAAIEQQSFAAVVSDVRLPDTDGLSLL 66
           L+ DDDI      Q L    G++VA+   G  AL  + +Q F  V+ DVR+ + DG++ L
Sbjct: 9   LVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQVFDLVLCDVRMAEMDGIATL 68

Query: 67  VALKNVQSLMPVILITGHGDVDMAVKALHQGAFDFIEKPFQPERLANTVAQAVSQYQNAL 126
             +K +   +PV+++T +  V+ AV+AL  GA D++ KP   + L  T+ +A++ + +++
Sbjct: 69  KEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDNLQATLEKALA-HTHSI 127

Query: 127 SSQSRAHYLASAKGLEQILIGQCKSIQLLREQIAKVAAMDTNVIIYGETGCGKELVAQCL 186
            +++ A   AS  G+    +G+  ++Q L  +IA VA  +  V+I+G++G GKELVA+ +
Sbjct: 128 DAETPA-VTASQFGM----VGKSPAMQHLLSEIALVAPSEATVLIHGDSGTGKELVARAI 182

Query: 187 HQASERQRGQFVAINCGAIPENLFESELFGHEAGAFTGAVKRRIGKLELADKGTLFLDEI 246
           H +S R     V +NC A+ E+L ESELFGHE GAFTGA KRR G+   AD GTLFLDEI
Sbjct: 183 HASSARSEKPLVTLNCAALNESLLESELFGHEKGAFTGADKRREGRFVEADGGTLFLDEI 242

Query: 247 ESMPLAMQVKVLRVLQDHVVERVGSNQPITIDLRVIAAAKEELRQH---AEFRQDLFYRL 303
             +   MQV++LR +Q+  V+RVGSNQ I++D+R+IAA   +L        FRQDL+YRL
Sbjct: 243 GDISPMMQVRLLRAIQEREVQRVGSNQIISVDVRLIAATHRDLAAEVNAGRFRQDLYYRL 302

Query: 304 NVAQLYLPPLRERGDDILLLFEHFCVQV----KPTWRSLSEADRLALLTYRWPGNVRELR 359
           NV  + +P LR+R +DI LL  HF  +     +   +  +      L+ Y WPGN+REL 
Sbjct: 303 NVVAIEVPSLRQRREDIPLLAGHFLQRFAERNRKAVKGFTPQAMDLLIHYDWPGNIRELE 362

Query: 360 NVALRYALDDSISVGEILASCPGMTEEEASAGLPLA----IQ-VHNFERKVIAQALHRHQ 414
           N   R  +   +  GE ++    +    AS  +PL     IQ +   E++VI  AL +  
Sbjct: 363 NAVERAVV---LLTGEYISE-RELPLAIASTPIPLGQSQDIQPLVEVEKEVILAALEKTG 418

Query: 415 GNISEVMKELDLPRRTLNQKMQK 437
           GN +E  ++L + R+TL  K+ +
Sbjct: 419 GNKTEAARQLGITRKTLLAKLSR 441