Pairwise Alignments

Query, 450 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 470 a.a., nitrogen regulation protein NR(I) from Enterobacter asburiae PDN3

 Score =  276 bits (706), Expect = 1e-78
 Identities = 175/474 (36%), Positives = 254/474 (53%), Gaps = 39/474 (8%)

Query: 1   MESQRIALIEDDDIVRQATGQWLQLAGFDVAMFADGASALAAIEQQSFAAVVSDVRLPDT 60
           M+   + +++DD  +R    + L  AG     F  G+  L A+  ++   ++SD+R+P  
Sbjct: 1   MQRGIVWVVDDDSSIRWVLERALTGAGLSCTTFESGSEVLDALTTKTPDVLLSDIRMPGM 60

Query: 61  DGLSLLVALKNVQSLMPVILITGHGDVDMAVKALHQGAFDFIEKPFQPERLANTVAQAVS 120
           DGL+LL  +K    ++PVI++T H D+D AV A  QGAFD++ KPF  +     V +A+S
Sbjct: 61  DGLALLKQIKQRHPMLPVIIMTAHSDLDAAVSAYQQGAFDYLPKPFDIDEAVALVERAIS 120

Query: 121 QYQNALSSQSRAHYLASAKGLEQILIGQCKSIQLLREQIAKVAAMDTNVIIYGETGCGKE 180
            YQ     Q   H  A   G    +IG+  ++Q +   I +++    +V+I GE+G GKE
Sbjct: 121 HYQE---QQQPRH--APDFGPTTDIIGEAPAMQDVFRIIGRLSRSSISVLINGESGTGKE 175

Query: 181 LVAQCLHQASERQRGQFVAINCGAIPENLFESELFGHEAGAFTGAVKRRIGKLELADKGT 240
           LVA  LH+ S R +  F+A+N  AIP++L ESELFGHE GAFTGA   R G+ E AD GT
Sbjct: 176 LVAHALHRHSPRAKAPFIALNMAAIPKDLIESELFGHEKGAFTGANTIRQGRFEQADGGT 235

Query: 241 LFLDEIESMPLAMQVKVLRVLQDHVVERVGSNQPITIDLRVIAAAKEELRQHAE---FRQ 297
           LFLDEI  MPL +Q ++LRVL D    RVG   P+ +D+R+IAA  + L Q  +   FR+
Sbjct: 236 LFLDEIGDMPLDVQTRLLRVLADGQFYRVGGYAPVKVDVRIIAATHQNLEQRVQEGKFRE 295

Query: 298 DLFYRLNVAQLYLPPLRERGDDILLLFEHF----CVQVKPTWRSLSEADRLALLTYRWPG 353
           DLF+RLNV +++LPPLRER +DI  L  HF      ++    + L      AL    WPG
Sbjct: 296 DLFHRLNVIRVHLPPLRERREDIPRLARHFLQVAARELGVEAKQLHPETDAALTRLAWPG 355

Query: 354 NVRELRNVA---LRYALDDSISVGEILASCPGMTEEEASAG--LP--------------- 393
           NVR+L N        A    + + ++ A     T  E+S G  LP               
Sbjct: 356 NVRQLENTCRWLTVMAAGQEVLIQDLPAELFEATAPESSTGHALPDSWATLLAQWADRAL 415

Query: 394 -------LAIQVHNFERKVIAQALHRHQGNISEVMKELDLPRRTLNQKMQKFGL 440
                  L+      ER ++  AL   QG+  E  + L   R TL +K+++ G+
Sbjct: 416 RSGHQNLLSEAQPEMERTLLTTALRHTQGHKQEAARLLGWGRNTLTRKLKELGM 469