Pairwise Alignments

Query, 450 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 470 a.a., nitrogen regulation protein NR(I) from Dickeya dianthicola ME23

 Score =  270 bits (691), Expect = 6e-77
 Identities = 174/478 (36%), Positives = 254/478 (53%), Gaps = 47/478 (9%)

Query: 1   MESQRIALIEDDDIVRQATGQWLQLAGFDVAMFADGASALAAIEQQSFAAVVSDVRLPDT 60
           M+   + +++DD  +R    + L  AG   A F +G  AL A+  Q+   ++SD+R+P  
Sbjct: 1   MQRGIVWIVDDDSSIRWVLERALTGAGLTCATFDNGTQALNALTTQTPDVLLSDIRMPGM 60

Query: 61  DGLSLLVALKNVQSLMPVILITGHGDVDMAVKALHQGAFDFIEKPFQPERLANTVAQAVS 120
           DGL+LL  +K    ++PVI++T H D+D AV A  QGAFD++ KPF  +     V +A+S
Sbjct: 61  DGLALLQQIKQRHPMLPVIIMTAHSDLDAAVSAYQQGAFDYLPKPFDIDEAVALVERAIS 120

Query: 121 QYQNALSSQSRAHYLASAKGLEQILIGQCKSIQLLREQIAKVAAMDTNVIIYGETGCGKE 180
            Y      Q +        G    +IG+  ++Q +   I +++    +V+I GE+G GKE
Sbjct: 121 HYME----QQQPARSQPISGPTTDIIGEAPAMQDVFRIIGRLSRSSISVLINGESGTGKE 176

Query: 181 LVAQCLHQASERQRGQFVAINCGAIPENLFESELFGHEAGAFTGAVKRRIGKLELADKGT 240
           LVA  LH+ S R +  F+A+N  AIP++L ESELFGHE GAFTGA + R G+ E AD GT
Sbjct: 177 LVAHALHRHSPRTKAPFIALNMAAIPKDLIESELFGHEKGAFTGANQIRQGRFEQADGGT 236

Query: 241 LFLDEIESMPLAMQVKVLRVLQDHVVERVGSNQPITIDLRVIAAAKEELR---QHAEFRQ 297
           LFLDEI  MPL +Q ++LRVL D    RVG    + +D+R+IAA  + L    Q  +FR+
Sbjct: 237 LFLDEIGDMPLDVQTRLLRVLADGQFYRVGGYAAVKVDVRIIAATHQNLELRVQEGKFRE 296

Query: 298 DLFYRLNVAQLYLPPLRERGDDILLLFEHFC------VQVKPTWRSLSEADRLALLTYRW 351
           DLF+RLNV +++LPPLRER +DI  L  +F       + V+P  ++L      AL    W
Sbjct: 297 DLFHRLNVIRVHLPPLRERREDIPRLARYFLQATARELGVEP--KNLHPETEAALTRLPW 354

Query: 352 PGNVRELRNV-----------------------------ALRYALDDSISVGEILASCPG 382
           PGNVR+L N                              A  + + DS +   +LA    
Sbjct: 355 PGNVRQLENTCRWLTVMAAGQEVLIQDLPPELFETTAPDATVHVMPDSWAT--LLAQWAD 412

Query: 383 MTEEEASAGLPLAIQVHNFERKVIAQALHRHQGNISEVMKELDLPRRTLNQKMQKFGL 440
                    L LA      ER ++  AL   QG+  E  + L   R TL +K+++ G+
Sbjct: 413 RALRSGHQNL-LAEAQPEMERTLLTTALRHTQGHKQEAARLLGWGRNTLTRKLKELGM 469