Pairwise Alignments

Query, 450 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 445 a.a., two-component system response regulator GlrR from Dickeya dianthicola ME23

 Score =  276 bits (707), Expect = 7e-79
 Identities = 172/453 (37%), Positives = 247/453 (54%), Gaps = 23/453 (5%)

Query: 2   ESQRIALIEDDDIVRQATGQWLQLAGFDVAMFADGASALAAIEQQSFAAVVSDVRLPDTD 61
           +S  + L++DD  + +  G  L   GF V   A+G  AL  + ++    V+SD+R+ + D
Sbjct: 5   KSASLLLVDDDPSLLKLLGMRLTSEGFTVTTAANGQDALRLLLREKIDLVISDLRMDEMD 64

Query: 62  GLSLLVALKNVQSLMPVILITGHGDVDMAVKALHQGAFDFIEKPFQPERLANTVAQAVSQ 121
           GL+L   ++  Q  MPVI++T HG +  AV A  QG F F+ KP   + L   +  A+  
Sbjct: 65  GLALFTEIQKNQPGMPVIILTAHGSIPEAVAATQQGVFSFLTKPVDRDALYKAIDDALKL 124

Query: 122 YQNALSSQSRAHYLASAKGLEQILIGQCKSIQLLREQIAKVAAMDTNVIIYGETGCGKEL 181
              A     RA  +  +  + ++L           EQ   VA  D +V+I G++G GKE+
Sbjct: 125 SPPASDESWRAAVVTRSPIMLRLL-----------EQAKMVAQSDVSVLINGQSGTGKEV 173

Query: 182 VAQCLHQASERQRGQFVAINCGAIPENLFESELFGHEAGAFTGAVKRRIGKLELADKGTL 241
           +AQ +H AS R    F+AINCGA+PE L ESELFGH  GAFTGAV +R G  + A+ GTL
Sbjct: 174 LAQAIHAASPRAGRPFIAINCGALPEPLLESELFGHARGAFTGAVSQREGLFQAAEGGTL 233

Query: 242 FLDEIESMPLAMQVKVLRVLQDHVVERVGSNQPITIDLRVIAAAKEEL---RQHAEFRQD 298
           FLDEI  MPLA+QVK+LRVLQ+  V  +GSN+ I I++R+I+A   +L    +  EFR+D
Sbjct: 234 FLDEIGDMPLALQVKLLRVLQERKVRPLGSNRDIDINVRIISATHRDLPKAMEKGEFRED 293

Query: 299 LFYRLNVAQLYLPPLRERGDDILLLFEHF----CVQVKPTWRSLSEADRLALLTYRWPGN 354
           L+YRLNV  L LP L ER +DI LL  H       + KP  RS S      L+   WPGN
Sbjct: 294 LYYRLNVVNLKLPALNERAEDIPLLANHLLREAAARHKPFVRSFSTDAMKRLMAASWPGN 353

Query: 355 VRELRNVALR-YALDDSISVGEILASCPGMTEEEASAGLPLAIQVHN-FERKVIAQALHR 412
           VR+L NV  +  AL  +  +G+ L        E  +  LP  ++  N FE   + + L  
Sbjct: 354 VRQLVNVIEQCVALSSAPVIGDALVE---QALEGENTALPTFVEARNQFELNYLRKLLQI 410

Query: 413 HQGNISEVMKELDLPRRTLNQKMQKFGLLRGDF 445
            +GN+++  +     R    + + +  L   DF
Sbjct: 411 AKGNVTQAARMAGRNRTEFYKLLARHELDANDF 443