Pairwise Alignments

Query, 450 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 460 a.a., Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  263 bits (673), Expect = 7e-75
 Identities = 171/464 (36%), Positives = 258/464 (55%), Gaps = 39/464 (8%)

Query: 5   RIALIEDDDIVRQATGQWLQLAGFDVAMFADGASALAAIEQQSFAAVVSDVRLPDT---- 60
           +I +++D++ +  A    L+    +V +  D       +   ++  ++ D+   +     
Sbjct: 8   KILIVDDNEDLLFAAKMLLKKYAKEVTIEKDPRRIPFLVNNNNYDVILLDMNFTEDTTSG 67

Query: 61  -DGLSLLVALKNVQSLMPVILITGHGDVDMAVKALHQGAFDFIEKPFQPERLANTVAQA- 118
            +G   L  +K +     VILIT  GDV+MAV+AL +GA DFI KP+Q E+L  T++ A 
Sbjct: 68  KEGFHWLKQIKEIDPKAVVILITAFGDVEMAVQALKEGATDFILKPWQNEKLLATLSAAS 127

Query: 119 -----VSQYQNALSSQSRAHYLASAKGLEQILIGQCKSIQLLREQIAKVAAMDTNVIIYG 173
                  Q  N +S +SR       K   +I IGQ  S++ +   I KVA  D NV+I G
Sbjct: 128 RLKESYDQVDN-ISQKSRQLQADMKKPFSEI-IGQSSSMKNIFSIIDKVAQTDANVLILG 185

Query: 174 ETGCGKELVAQCLHQASERQRGQFVAINCGAIPENLFESELFGHEAGAFTGAVKRRIGKL 233
           E G GKEL+A+ +H  S R+   FV ++ GAI E LFESELFGH+ GAFT A + R G+ 
Sbjct: 186 ENGTGKELIARAIHDRSLRRDEIFVGVDMGAITETLFESELFGHKRGAFTDAKEDRAGRF 245

Query: 234 ELADKGTLFLDEIESMPLAMQVKVLRVLQDHVVERVGSNQPITIDLRVIAAAK---EELR 290
           E+ADKGTLFLDEI ++ + +Q K+L VLQ   V R+G+N+ I +D+R+I A      ++ 
Sbjct: 246 EVADKGTLFLDEIGNLSMPLQSKLLTVLQKREVTRIGTNKSIPVDIRLICATNMKVHDMV 305

Query: 291 QHAEFRQDLFYRLNVAQLYLPPLRERGDDILLLFEHF----CVQVKPTWRSLSEADRLAL 346
               FRQDL YR+N  +++LPPLRER DDI LL  HF      + +  +     A    L
Sbjct: 306 MENTFRQDLLYRVNTVEIFLPPLRERQDDIPLLANHFLKVYAKKYRKDFSGFKPAAIQLL 365

Query: 347 LTYRWPGNVRELRNVALRYALDDSISVGE----------ILASCPGMTEEEASAGLPLAI 396
             Y WPGN+RE     L++A++ +I + E           L+S P   + + +  L L  
Sbjct: 366 QNYSWPGNIRE-----LQHAIERAIIMAEGQELDSRDFFFLSSKPSAEKVKTNGTLNL-- 418

Query: 397 QVHNFERKVIAQALHRHQGNISEVMKELDLPRRTLNQKMQKFGL 440
                E+ VI +A+ ++ GNIS+  KEL L R +L ++++K+GL
Sbjct: 419 --DEVEKNVIQKAIDKNGGNISKAAKELGLTRASLYRRLEKYGL 460