Pairwise Alignments

Query, 450 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 385 a.a., Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  265 bits (676), Expect = 2e-75
 Identities = 149/367 (40%), Positives = 219/367 (59%), Gaps = 11/367 (2%)

Query: 5   RIALIEDDDIVRQATGQWLQLAGFDVAMFADGASALAAIEQQSFAAVVSDVRLPDTDGLS 64
           +I +I+D+ ++R    + L+   +++    DG   L  IE Q F  V+ D+++P  DGL 
Sbjct: 3   KILIIDDEKVIRSTLKEILEYEDYEIHEAQDGVEGLKKIESQDFDLVLCDIKMPKMDGLE 62

Query: 65  LLVALKNVQSLMPVILITGHGDVDMAVKALHQGAFDFIEKPFQPERLANTVAQAVSQYQN 124
           +L  +         I+I+ HG ++ AV+A  +GAFDFI KP    RL  TV  A+ +   
Sbjct: 63  VLDKVYQSDKQPQFIMISAHGSIESAVEATKKGAFDFIPKPPDLNRLLLTVRNALEKKD- 121

Query: 125 ALSSQSRAHYLASAKGLEQILIGQCKSIQLLREQIAKVAAMDTNVIIYGETGCGKELVAQ 184
            L ++++      +K L+  ++G+  +I  ++E I KVA  D  V+I G  G GKELVA 
Sbjct: 122 -LVTETKVLKKKLSKKLD--MVGESAAILQVKETIEKVAPTDARVLITGPNGTGKELVAH 178

Query: 185 CLHQASERQRGQFVAINCGAIPENLFESELFGHEAGAFTGAVKRRIGKLELADKGTLFLD 244
            LHQ S R +  F+A+NC AIP  L ESELFGHE GAFT A K+R GK E A+ GT+FLD
Sbjct: 179 WLHQKSGRNKSPFIAVNCAAIPAELIESELFGHEKGAFTSANKQRQGKFEQANGGTIFLD 238

Query: 245 EIESMPLAMQVKVLRVLQDHVVERVGSNQPITIDLRVIAAAKEELRQHAE---FRQDLFY 301
           EI  M L+ Q KVLR LQ+H + RVG ++ I ID+RV+AA  ++L++  E   FR+DL++
Sbjct: 239 EIGDMSLSAQAKVLRALQEHKISRVGGDKDIKIDVRVLAATNKDLKKEIEENNFREDLYH 298

Query: 302 RLNVAQLYLPPLRERGDDILLLFEHFCVQVK----PTWRSLSEADRLALLTYRWPGNVRE 357
           RL+V  + +P L++R +DI LL + F   +      T + + +     L  Y W GN+RE
Sbjct: 299 RLSVILIQVPALKDRKEDIPLLVDRFLEDIAKEYGTTKKDIDDKAIAKLQEYPWTGNIRE 358

Query: 358 LRNVALR 364
           LRNV  R
Sbjct: 359 LRNVVER 365