Pairwise Alignments

Query, 450 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 443 a.a., sigma-54 dependent transcriptional regulator from Brevundimonas sp. GW460-12-10-14-LB2

 Score =  350 bits (898), Expect = e-101
 Identities = 200/449 (44%), Positives = 281/449 (62%), Gaps = 24/449 (5%)

Query: 6   IALIEDDDIVRQATGQWLQLAGFDVAMFADGASALAAIEQQSFAAVVSDVRLPDTDGLSL 65
           +ALIEDD   R A  + L L G+DV  F     AL AI+      V++D+R+P  DG  L
Sbjct: 9   VALIEDDADFRHALVERLTLEGYDVRPFPGAEPALRAIDADFPGVVITDLRMPGLDGRQL 68

Query: 66  LVALKNVQSLMPVILITGHGDVDMAVKALHQGAFDFIEKPFQPERLANTVAQAVSQYQNA 125
           L  L+ + + +P+I+ITGHGD+  AV A+  GA+DF+ KPF  ERL +++ +A+ +    
Sbjct: 69  LSRLQALDAALPIIMITGHGDITDAVAAMKDGAYDFVAKPFPFERLQDSMNRALEKRGLV 128

Query: 126 LSSQSRAHYLASAKGLEQILIGQCKSIQLLREQIAKVAAMDTNVIIYGETGCGKELVAQC 185
           L ++ R   +AS  G E  L G  ++I  LR  IA++A    +V+I GETG GKE VA+ 
Sbjct: 129 LENR-RLLAMASDSGQELPLAGSSRAITALRATIAQIADARMDVLIEGETGTGKEAVARA 187

Query: 186 LHQASERQRGQFVAINCGAIPENLFESELFGHEAGAFTGAVKRRIGKLELADKGTLFLDE 245
           LH    R+   FVA+NCGA+P+ L ESELFGHE GAF GA++RR+G +E A  G+LFLDE
Sbjct: 188 LHNGGRRRLAPFVAVNCGALPDGLIESELFGHELGAFAGALRRRVGHVERAHNGSLFLDE 247

Query: 246 IESMPLAMQVKVLRVLQDHVVERVGSNQPITIDLRVIAAAKEELRQHAE---FRQDLFYR 302
           +ESMPLA+QVK+LRVL++  V  +G+N+P  +DLRV+A++K +L + A    FR+DL+YR
Sbjct: 248 VESMPLAVQVKILRVLEEREVHPIGANEPRALDLRVLASSKIDLGEAARGGAFREDLYYR 307

Query: 303 LNVAQLYLPPLRERGDDILLLFEHFCVQVKP----TWRSLSEADRLALLTYRWPGNVREL 358
           LNV +L +PPLRER +DI LLF HF  +          S+S++ R  L+   WPGN+REL
Sbjct: 308 LNVVRLRVPPLRERREDIPLLFAHFLRRAADRHGVDTPSISDSVRRLLVEADWPGNIREL 367

Query: 359 RNVALRYA--LDDSISVGEILASCPGMTEEEASAGLPLAIQVHNFERKVIAQALHRHQGN 416
            + A R A  LDD              T      GL L  +V+ FE +++  AL  H G+
Sbjct: 368 AHFAERVALSLDD--------------TTRPPDEGLSLPDRVNRFEAELLRDALQSHCGD 413

Query: 417 ISEVMKELDLPRRTLNQKMQKFGLLRGDF 445
           IS V+ E+ +PR+TL  K+Q+ GL   DF
Sbjct: 414 ISAVLAEMQVPRKTLYDKLQRHGLKPADF 442