Pairwise Alignments

Query, 450 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 460 a.a., C4-dicarboxylate transport transcriptional regulatory protein DctD from Azospirillum sp. SherDot2

 Score =  379 bits (973), Expect = e-109
 Identities = 216/449 (48%), Positives = 294/449 (65%), Gaps = 11/449 (2%)

Query: 6   IALIEDDDIVRQATGQWLQLAGFDVAMFADGASALAAIEQQSFAAVVSDVRLPDTDGLSL 65
           +  I+D+  +R +  QWLQLAGF    F     AL  +       +V+DVR+P  DG+++
Sbjct: 10  VLFIDDELAMRVSVTQWLQLAGFAAQGFETPQLALDLLSPDFPGVLVTDVRMPRMDGMAV 69

Query: 66  LVALKNVQSLMPVILITGHGDVDMAVKALHQGAFDFIEKPFQPERLANTVAQAVSQYQNA 125
           L       + +PVIL+TGHGDV +AV+A+ +GA+DFIEKPF+P+ L   + +AV + +  
Sbjct: 70  LERALERDADLPVILVTGHGDVALAVEAMRRGAYDFIEKPFEPDHLVAVLRRAVEKRRLV 129

Query: 126 LSSQSRAHYLASAKGLEQILIGQCKSIQLLREQIAKVAAMDTNVIIYGETGCGKELVAQC 185
           L ++      A   G+E  LIG   +I  L+  +  +AA   +V+I+GETG GKELVA+C
Sbjct: 130 LENRGLRRRAAGG-GIEARLIGTSPAIAELQRDLIDLAATSASVLIHGETGTGKELVARC 188

Query: 186 LHQASER-QRGQFVAINCGAIPENLFESELFGHEAGAFTGAVKRRIGKLELADKGTLFLD 244
           LH    R ++G FVA+NCGAIP+++ ESELFGHE GAFTGA +RR GKLE +  GTLFLD
Sbjct: 189 LHDFGSRGEKGAFVAVNCGAIPDSMAESELFGHEPGAFTGATQRRAGKLEHSSGGTLFLD 248

Query: 245 EIESMPLAMQVKVLRVLQDHVVERVGSNQPITIDLRVIAAAKEELRQHAE---FRQDLFY 301
           EIESMPLA+QVK+LR LQ+  +ER+GSN+ + +DLR++AA K +L   +E   FR DL+Y
Sbjct: 249 EIESMPLAIQVKLLRALQERTIERLGSNKQVAVDLRLVAATKIDLLDLSEAGGFRADLYY 308

Query: 302 RLNVAQLYLPPLRERGDDILLLFEHFCVQVKPTW----RSLSEADRLALLTYRWPGNVRE 357
           RLNVA+L++PPLR R +DI LLF++F  +         R L  AD  ALL + WPGNVRE
Sbjct: 309 RLNVAELHIPPLRARAEDIPLLFDYFTAEFAARHSREPRPLEPADFDALLAHDWPGNVRE 368

Query: 358 LRNVALRYALD-DSISVGEILASCPGMTEEEASAGLPLAIQVHNFERKVIAQALHRHQGN 416
           LRN+A R+ L     SV  +L   P +  E A+    LA QV  FE++ I QAL R +G+
Sbjct: 369 LRNLAERHVLSVGRSSVAGLLRRRP-VGGEAAAPPRALADQVDAFEKRAIEQALERCKGD 427

Query: 417 ISEVMKELDLPRRTLNQKMQKFGLLRGDF 445
           I  VM  LD+PRRTLN+KM + GL R  F
Sbjct: 428 IKAVMDLLDIPRRTLNEKMARHGLDRTRF 456